GGGenome | Results

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2025-03-29 12:34:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Vigna angularis mRNA, clone: VEPS10_I04.
HX942297.1:828-847

CTTAAGAAACTCACTTATGAGGAGAGAAAG828GCTAAATTGGTTGCACGGTTGCAGGCTCTCAACTCTGCTGCTGGTGATGA

Vigna angularis mRNA, clone: VES06A21.
HX944363.1:307-326

TCATCACCAGCAGCAGAGTTGAGAGCCTGC307AACCGTGCAACCAATTTAGCCTTTCTCTCCTCATAAGTGAGTTTCTTAAG

Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
AP015042.1:29156090-29156109

TCATCACCAGCAGCAGAGTTGAGAGCCTGC29156090AACCGTGCAACCAATTTAGCCTTTCTCTCCTCATAAGTGAGTTTCTTAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.194 | 0.185 | search_plus_done; http://172.18.8.135:50400/match?q=GCTAAATTGGTTGCACGGTT&k=0&no_gap=0&offset=0&limit=50
0.304 | 0.110 | search_minus_done; http://172.18.8.135:50400/match?q=AACCGTGCAACCAATTTAGC&k=0&no_gap=0&offset=0&limit=49
0.305 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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