GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 14:20:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Triticum aestivum genome assembly, chromosome: 7D.
OV100757.1:636521347-636521367
AGCTGGCTTTTGGCTTAACAAGTTTCTTAA636521347GCTACAAACTTTGTTGTACCCATTTACGCGGCCCATGAAAGAGCACACCTC
Triticum aestivum genome assembly, chromosome: 7D.
OW530330.1:636521347-636521367
AGCTGGCTTTTGGCTTAACAAGTTTCTTAA636521347GCTACAAACTTTGTTGTACCCATTTACGCGGCCCATGAAAGAGCACACCTC
Populus nigra genome assembly, chromosome: 8.
OX637679.1:21499287-21499307
TACCCTCTTACAAATGCAAACAAAAAACAG21499287GCTACAAACTTTGTTGTACCCAACAAAACATGAGAGCAACTCTCTCTCTCT
Populus nigra mRNA, clone: PnFL2-056_J22, 5'end.
DB884780.1:107-127
AGAGAGAGAGAGTTGCTCTCATGTTTTGTT107GGGTACAACAAAGTTTGTAGCCTGTTTTTTGTTTGCATTTGTAAGAGGGTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCTACAAACTTTGTTGTACCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTACAAACTTTGTTGTACCC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.093 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=GCTACAAACTTTGTTGTACCC&k=0&no_gap=0&offset=0&limit=50
0.149 | 0.056 | search_minus_done; http://172.18.8.135:50400/match?q=GGGTACAACAAAGTTTGTAGC&k=0&no_gap=0&offset=0&limit=47
0.150 | 0.001 | cgi_end;

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