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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:38:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 796 from Patent WO2010034681.
HC500821.1:853-875
CAAGAGCCATGGAAAAATGCAAGAACAGGA853GCTAGCTAGACTAGTCTTTACAGTCCATAACCTGCTCCATGTGATGCCCAGTT
Sequence 796 from patent US 9062322.
HK747642.1:853-875
CAAGAGCCATGGAAAAATGCAAGAACAGGA853GCTAGCTAGACTAGTCTTTACAGTCCATAACCTGCTCCATGTGATGCCCAGTT
Sequence 796 from Patent EP2910639.
JE863655.1:853-875
CAAGAGCCATGGAAAAATGCAAGAACAGGA853GCTAGCTAGACTAGTCTTTACAGTCCATAACCTGCTCCATGTGATGCCCAGTT
P482 Whero seedling lambda ZapII cDNA library Pisum sativum cDNA clone P482 similar to Auxin regulated protein, mRNA sequence.
AA427337.1:724-746
CAAGAGCCATGGAAAAATGCAAGAACAGAA724GCTAGCTAGACTAGTCTTTACAGTCCATAACCTGCTCCATCCTCAGTGNTACT
Medicago truncatula EST, clone mt--abc955111g09.
AJ497622.1:74-96
CAAGAGCCATGGAAAAATGCAAGAACAGGA74GCTAGCTAGACTAGTCTTTACAGTCCATAACCTGCTCCATGTGATGCCCAGTT
EST509013 HOGA Medicago truncatula cDNA clone pHOGA-16D10 5' end, mRNA sequence.
BG647394.1:521-543
CAAGAGCCATGGAAAAATGCAAGAACAGGA521GCTAGCTAGACTAGTCTTTACAGTCCATAACCTGCTCCATGTGATGCCCAGTT
NF017D11FL1F1093 Developing flower Medicago truncatula cDNA clone NF017D11FL 5', mRNA sequence.
BI271703.1:457-479
CAAGAGCCATGGAAAAATGCAAGAACAGGA457GCTAGCTAGACTAGTCTTTACAGTCCATAACCTGCTCCATGTGATGCCCAGTT
NF005F10PH1F1090 Phoma-infected Medicago truncatula cDNA clone NF005F10PH 5', mRNA sequence.
BQ138657.1:291-313
CAAGAGCCATGGAAAAATGCAAGAACAGGA291GCTAGCTAGACTAGTCTTTACAGTCCATAACCTGCTCCATGTGATGCCCAGTT
s13dSG36C0300020_327476 Glandular trichomes Medicago sativa cDNA, mRNA sequence.
CO514408.1:474-496
CTAGAGCCATGGAAAAATGCAAGAACAGGA474GCTAGCTAGACTAGTCTTTACAGTCCATAACCTGCTCCATGTGATGCCCAGTT
MTGland_B042_2007-06-23/MTGlandB042_B10_039_1 Medicago truncatula A17 glandular trichome Medicago truncatula cDNA, mRNA sequence.
EX532853.1:399-421
CAAGAGCCATGGAAAAATGCAAGAACAGGA399GCTAGCTAGACTAGTCTTTACAGTCCATAACCTGCTCCATGTGATGCCCAGTT
LCUSE1NG_T3_052_H08_15JUN2007_050 LCUSE1NG Lens culinaris cDNA, mRNA sequence.
GT623356.1:457-479
CAAGAGCCATGGAAAAATGCAAGAACAGAA457GCTAGCTAGACTAGTCTTTACAGTCCATAACCTGCTCCATCCTCAGTGCTACT
Vicia faba mRNA, clone: VfEES07D14, unspecified EST.
HX902121.1:812-834
CCAGAGCCATGGAAAAGTGCAAGAATAGAA812GCTAGCTAGACTAGTCTTTACAGTCCATAGGCTGCTCCATCCTCAGTGCTACT
Vicia faba mRNA, clone: VfFES09D10, unspecified EST.
HX906501.1:761-783
AAGAGCCATGGAAAAGTGCAAGAATAGAAA761GCTAGCTAGACTAGTCTTTACAGTCCATAGCCTGCTCCATCCTCAGTGCTACT
TSA: Pisum sativum Ps_contig_mira-ass_3653 mRNA sequence.
JI900485.1:160-182
CAAGAGCCATGGAAAAATGCAAGAACAGAA160GCTAGCTAGACTAGTCTTTACAGTCCATAACCTGCTCCATCCTCAGTGCTACT
Medicago truncatula clone MTYF1_F2_F3_F41G-C-1 unknown mRNA.
BT051232.1:799-821
CAAGAGCCATGGAAAAATGCAAGAACAGGA799GCTAGCTAGACTAGTCTTTACAGTCCATAACCTGCTCCATGTGATGCCCAGTT
Medicago truncatula clone JCVI-FLMt-11K12 unknown mRNA.
BT148720.1:799-821
CAAGAGCCATGGAAAAATGCAAGAACAGGA799GCTAGCTAGACTAGTCTTTACAGTCCATAACCTGCTCCATGTGATGCCCAGTT
Medicago lupulina genome assembly, chromosome: 3.
OY283141.1:20430998-20431020
CAAGAGCCATGGAAAAATGCAAGAACAGGA20430998GCTAGCTAGACTAGTCTTTACAGTCCATAACCTGCTCCATGTGATGCCCAGTT
Vicia faba mRNA, clone: VfEES05G13, unspecified EST.
HX901483.1:292-314
AGTAGCACTGAGGATGGAGCAGGCTATGGA292CTGTAAAGACTAGTCTAGCTAGCTTCTATTCTTGCACTTTTCCATGGCTCTTG
Vicia faba mRNA, clone: VfPES08L23, unspecified EST.
HX910367.1:263-285
AGTAGCACTGAGGATGGAGCAGGCTATGGA263CTGTAAAGACTAGTCTAGCTAGCTTCTATTCTTGCACTTTTCCATGGCTCTTG
TSA: Lens culinaris contig01775.Lecu mRNA sequence.
JI848055.1:283-305
AGTAGCACTGAGGATGGAGCAGGTTATGGA283CTGTAAAGACTAGTCTAGCTAGCTTCTGTTCTTGCATTTTTCCATGGCTCTTG
TSA: Pisum sativum Ps_contig_mira-ass_427 mRNA sequence.
JI897278.1:102-124
AGTAGCACTGAGGATGGAGCAGGTTATGGA102CTGTAAAGACTAGTCTAGCTAGCTTCTGTTCTTGCATTTTTCCATGGCTCTTG
TSA: Pisum sativum Ps_contig_mira-ass_81869 mRNA sequence.
JI963852.1:164-186
AGTAGCACTGAGGATGGAGCAGGTTATGGA164CTGTAAAGACTAGTCTAGCTAGCTTCTGTTCTTGCTATTTTTCCATGGCTCTT
TSA: Medicago sativa cultivar Chilean F0D_1273 mRNA sequence.
JL867728.1:318-340
AACTGGGCATCACATGGAGCAGGTTATGGA318CTGTAAAGACTAGTCTAGCTAGCTCCTGTTCTTGCATTTTTCCATGGCTCTAG
TSA: Medicago sativa subsp. falcata cultivar Wisfal FZ0_9830 mRNA sequence.
JL891007.1:317-339
AACTGGGCATCACATGGAGCAGGTTATGGA317CTGTAAAGACTAGTCTAGCTAGCTCCTGTTCTTGCATTTTTCCATGGCTCTAG
TSA: Pisum sativum contig00837.PisaPYK9 mRNA sequence.
JR951571.1:240-262
AGTAGCACTGAGGATGGAGCAGGTTATGGA240CTGTAAAGACTAGTCTAGCTAGCTTCTGTTCTTGCATTTTTCCATGGCTCTTG
Medicago arabica genome assembly, chromosome: 2.
OX326965.1:43907841-43907863
AACTGGGCATCACATGGAGCAGGTTATGGA43907841CTGTAAAGACTAGTCTAGCTAGCTCCTGTTCTTGCATTTTTCCATGGCTCTTG
Vicia faba genome assembly, chromosome: 3.
OX451738.1:385403281-385403303
AGTAGCACTGAGGATGGAGCAGGCTATGGA385403281CTGTAAAGACTAGTCTAGCTAGCTTCTATTCTTGCACTTTTCCATGGCTCTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTAGCTAGACTAGTCTTTACAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTAGCTAGACTAGTCTTTACAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.970 | 0.961 | search_plus_done; http://172.18.8.135:50400/match?q=GCTAGCTAGACTAGTCTTTACAG&k=0&no_gap=0&offset=0&limit=50
1.288 | 0.318 | search_minus_done; http://172.18.8.135:50400/match?q=CTGTAAAGACTAGTCTAGCTAGC&k=0&no_gap=0&offset=0&limit=33
1.294 | 0.007 | cgi_end;

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