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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:49:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mouse DNA sequence from clone RP23-415C3 on chromosome 2.
AL929209.17:165762-165780
ATCCTACCACTAAAAAAACTATTGGCATTT165762GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus genome assembly, chromosome: 2.
OW971562.1:10230110-10230128
ATCCTACCACTAAAAAAACTATTGGCATTT10230110GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus genome assembly, chromosome: 2.
OW971574.1:10196043-10196061
ATCCTACCACTAAAAAAACTATTGGCATTT10196043GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus genome assembly, chromosome: 2.
OW971595.1:10127745-10127763
TCCTACCACTAAAAAAAACTATTGGCATTT10127745GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus domesticus genome assembly, chromosome: 2.
OW971624.1:10192686-10192704
ATCCTACCACTAAAAAAACTATTGGCATTT10192686GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus genome assembly, chromosome: 2.
OW971637.1:10215827-10215845
ATCCTACCACTAAAAAAACTATTGGCATTT10215827GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus molossinus genome assembly, chromosome: 2.
OW971659.1:10072605-10072623
ATCCTACCACTAAAAAAACTATTGGCATTT10072605GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus spretus genome assembly, chromosome: 2.
OW971679.1:10370219-10370237
ATCCTACCACTAAAAAAACTATTGGCATTT10370219GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus genome assembly, chromosome: 2.
OW971710.1:10092939-10092957
ATCCTACCACTAAAAAAACTATTGGCATTT10092939GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus genome assembly, chromosome: 2.
OW971721.1:10068277-10068295
ATCCTACCACTAAAAAAACTATTGGCATTT10068277GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus genome assembly, chromosome: 2.
OW971742.1:10166142-10166160
ATCCTACCACTAAAAAAACTATTGGCATTT10166142GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus musculus genome assembly, chromosome: 2.
OW971763.1:10186715-10186733
ATCCTACCACTAAAAAAACTATTGGCATTT10186715GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus genome assembly, chromosome: 2.
OW971784.1:10153199-10153217
ATCCTACCACTAAAAAAACTATTGGCATTT10153199GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus genome assembly, chromosome: 2.
OW971805.1:10111063-10111081
ATCCTACCACTAAAAAAACTATTGGCATTT10111063GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus castaneus genome assembly, chromosome: 2.
OW971836.1:10014964-10014982
ATCCTACCACTAGAAAAACTATTGGCATTT10014964GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus genome assembly, chromosome: 2.
OW971855.1:10150063-10150081
ATCCTACCACTAAAAAAACTATTGGCATTT10150063GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus genome assembly, chromosome: 2.
OX389796.1:19803088-19803106
ATCCTACCACTAAAAAAACTATTGGCATTT19803088GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus genome assembly, chromosome: 2.
OX390146.1:12052954-12052972
ATCCTACCACTAAAAAAACTATTGGCATTT12052954GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Mus musculus genome assembly, chromosome: 2.
OX439015.1:17159399-17159417
ATCCTACCACTAAAAAAACTATTGGCATTT17159399GCTAGCTAGCTGCAGAGAGAGGTGGGCAGTCAGTTTTCTTTAAGAGACT
Onychomys leucogaster genome assembly, chromosome: 14.
OX460384.1:41748467-41748485
GGGATGAGGAAGGATGGAGTAGAGAGAGTC41748467GCTAGCTAGCTGCAGAGAGAACAAGAGATGAACATGCCATGCTAATGAA
Onychomys leucogaster genome assembly, chromosome: 14.
OX460431.1:40703504-40703522
GGGATGAGGAAGGATGGAGTAGAGAGAGTC40703504GCTAGCTAGCTGCAGAGAGAACAAGAGATGAACATGCCATGCTAATGAA
Paracentrotus lividus EST, clone MPMGp1174I213Q, 5' end.
AM218553.1:258-276
CTGGCGACAACACACACGTCGCCCAAGCTA258GCTAGCTAGCTGCAGAGAGAGCTAGAGTCACAACAATTGCATTCGAAGC
OGIAG08TV ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0352B15, genomic survey sequence.
CC339598.1:599-617
TTCCTGCTGCTGCTGCTGCTGGTGGTGGTA599GCTAGCTAGCTGCAGAGAGAAAGGATCGGTGGTTCATTTATATATAATA
OG5BC57TC ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0822I17, genomic survey sequence.
CG233714.1:87-105
TTCCTGCTGCTGCTGCTGCTGGTGGTGGTA87GCTAGCTAGCTGCAGAGAGAAAGGATCGGTGGTTCATTTATATATAATA
BD_CBa0020D15.f BD_CBa Brachypodium distachyon genomic clone BD_CBa0020D15 5', genomic survey sequence.
FI647181.1:365-383
AGTGATCACCTGGCTAGCAATGGCTGCTAT365GCTAGCTAGCTGCAGAGAGATTCCTTCGGTTCTCCTGTGAAGAACAAAC
Oryza minuta clone OM__Ba0240N19, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces.
AC232128.1:9516-9534
AGTACTATCTGCAGTTTCAATAGTTAGTTA9516GCTAGCTAGCTGCAGAGAGTTGGCCAGGGAGAGAGAAGAAAGTGAGCTA
Oryza minuta clone OM__Ba0091N09, complete sequence.
AC232154.1:110527-110545
AGTACTATCTGCAGTTTCAATAGTTAGTTA110527GCTAGCTAGCTGCAGAGAGTTGGCCAGGGAGAGAGAAGAAAGTGAGCTA
Zea mays cultivar LT2357 chromosome 6.
CP116744.1:141267578-141267596
CTCCTGCTGCTGCTGCTGCTGGTGGTGGTA141267578GCTAGCTAGCTGCAGAGAGAGAGAGGATCGGTGGTTCATTTATATATAA
Tremella fuciformis strain TWW01-AX chromosome 5.
CP130134.1:485495-485513
GGAAAGATCTGGGGGTCATTGTCAGCACAT485495GCTAGCTAGCTGCAGAGAGAGGAGAGAGTAGAAGAGCATGGTGATGGGC
Aegilops umbellulata cultivar TA1851 chromosome 4U.
CP136057.1:657020488-657020506
TGCTTGCCTGCTTCAACTAGCCCTATCTAA657020488GCTAGCTAGCTGCAGAGAGCAAACACATGGCAGTAGTGTAGTGACCCTG
Zea mays genome assembly, chromosome: 6.
LR897972.1:141790171-141790189
TTCCTGCTGCTGCTGCTGCTGGTGGTGGTA141790171GCTAGCTAGCTGCAGAGAGAAAGGATCGGTGGTTCATTTATATATAATA
Potentilla anserina genome assembly, chromosome: 5.
OW176985.1:17965244-17965262
TACTGTGGTATCATCGATCAAGAGGCTATA17965244GCTAGCTAGCTGCAGAGAGCAGACTGGAATGGGGAGATCTCAATGGAAT
Geum urbanum genome assembly, chromosome: 1.
OX326997.1:24632062-24632080
ATATTCTTACATGGGTCCTTCTAGACTAAA24632062GCTAGCTAGCTGCAGAGAGTTCGTTAACTAACCCCCGTCGAAGCCAAAA
Vicia faba genome assembly, chromosome: 1S.
OX451735.1:698224702-698224720
AGACTTATGTCAACATGCTTGTACTGGCTT698224702GCTAGCTAGCTGCAGAGAGTTGGTACAAGTTGCTTGATATCTGTGGACA
Vicia faba genome assembly, chromosome: 1L.
OX451736.1:484874300-484874318
GTAACTTAAACCAAAAGCTTGTACTTGCTT484874300GCTAGCTAGCTGCAGAGAGTTGGTACAAGTTGCTTGTTATCTGTGGAAA
Vicia faba genome assembly, chromosome: 4.
OX451739.1:43873895-43873913
GTGATCATGCTAACAGGCTTGTACTTGCTT43873895GCTAGCTAGCTGCAGAGAGTTAGTGTACATTGCTTGATATCTGTGGAAA
Vicia faba genome assembly, chromosome: 6.
OX451741.1:959255600-959255618
GTGACCATGCTAACAGGCTCGTACTTGCTT959255600GCTAGCTAGCTGCAGAGAGTTGGTATACATTGCTTGATATCTGTGGAAT
Phragmites australis genome assembly, chromosome: 18.
OY282629.1:28301892-28301910
ACCTCAGAGCGTCGTCGATCGAACGTGGTA28301892GCTAGCTAGCTGCAGAGAGATCAGGCCAGGCCGCCAGTCGATCGATCTC
Apodemus sylvaticus genome assembly, chromosome: 14.
OX359311.1:68172703-68172721
AAGACAGCACTCTCAGAACAGACTGCCCGT68172703CTCTCTGCAGCTAGCTAGCAATTGCCAATAGATTTTTTTTCTTTTAGCA
Micromys minutus genome assembly, chromosome: 6.
OZ004786.1:48774817-48774835
GCACTCTTAGGGAAAACTGACTGCCCCCCT48774817CTCTCTGCAGCTAGCTAGCAATTGCCAATATTTTTTAGTGGCAGGCCTT
Plectropomus leopardus DNA, chromosome 14, nearly complete sequence.
AP022713.1:17582279-17582297
AACTTGACCATAGAAGTCTGCATTATCATC17582279CTCTCTGCAGCTAGCTAGCCAGCAGTCTAATTCTGAAGGATAAACATCT
OGAJD95TC ZM2_0.7_1.5_KB Zea mays genomic clone ZMMBMa0073O22, genomic survey sequence.
BZ535384.1:610-628
TATTATATATAAATGAACCACCGATCCTTT610CTCTCTGCAGCTAGCTAGCTACCACCACCAGCAGCAGCAGCAGCAGGAA
OGIAG08TH ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0352B15, genomic survey sequence.
CC339584.1:720-738
TATTATATATAAATGAACCACCGATCCTTT720CTCTCTGCAGCTAGCTAGCTACCACCACCAGCAGCAGCAGCAGCAGGAA
OGNAB77TV ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0324M10, genomic survey sequence.
CC691875.1:33-51
TATTATATATAAATGAACCACCGATCCTTT33CTCTCTGCAGCTAGCTAGCTACCACCACCAGCAGCAGCAGCAGCAGGAA
OGWJP51TH ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0603I06, genomic survey sequence.
CG367677.1:45-63
TATTATATATAAATGAACCACCGATCCTTT45CTCTCTGCAGCTAGCTAGCTACCACCACCAGCAGCAGCAGCAGCAGGAA
Oryza officinalis clone OO__Ba0051K01, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
AC225240.1:62552-62570
TACCTCACCTTCTTCTCTCTCCCTGGCCAG62552CTCTCTGCAGCTAGCTAGCTAACTATGGAAACTGCAGATAGTACTAGCT
Oryza officinalis clone OO__Ba0035K24, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces.
AC225920.2:218318-218336
TACCTCACCTTCTTCTCTCTCCCTGGCCAG218318CTCTCTGCAGCTAGCTAGCTAACTATGGAAACTGCAGATAGTACTAGCT
Zea mays cultivar B73 chromosome 6 clone CH201-77D13, *** SEQUENCING IN PROGRESS ***, 14 unordered pieces.
AC233866.4:108523-108541
TATTATATATAAATGAACCACCGATCCTTT108523CTCTCTGCAGCTAGCTAGCTACCACCACCAGCAGCAGCAGCAGCAGGAA
Cenchrus purpureus cultivar elephant grass chromosome B6.
CP053466.1:114955150-114955168
ACCGAGACAAGCACGACGTATGGCTGTGGA114955150CTCTCTGCAGCTAGCTAGCTAGTGTCGCCGGGCTGGGGTTGATTTGTCT
Tremella fuciformis strain Tr01 chromosome 1.
CP136032.1:1955715-1955733
GCCCATCACCATGCTCTTCTACTCTCTCCT1955715CTCTCTGCAGCTAGCTAGCATGTGCTGACAATGACCCCCAGATCTTTCC
Tremella fuciformis cultivar Tr01 chromosome 05B.
CP136482.1:3079433-3079451
GCCCATCACCATGCTCTTCTACTCTCTCCT3079433CTCTCTGCAGCTAGCTAGCATGTGCTGACAATGACCCCCAGATCATTCC
Tremella fuciformis cultivar Tr01 chromosome 01A.
CP136490.1:1978416-1978434
GCCCATCACCATGCTCTTCTACTCTCTCCT1978416CTCTCTGCAGCTAGCTAGCATGTGCTGACAATGACCCCCAGATCTTTCC
Secale cereale genome assembly, chromosome: 5R.
LR738713.1:833438860-833438878
CCACCGCCATCGCTGCTGCCTCAAGGCTCA833438860CTCTCTGCAGCTAGCTAGCTAGTCTCTCTCGACACTCTTGGTGGCCGGC
Avena insularis genome assembly, chromosome: 6C.
OU342343.1:40377971-40377989
GTTAGGTAGCAGCGTGAGTACGTAGTATTT40377971CTCTCTGCAGCTAGCTAGCATGTGAAAAATAATCCGACGACATTTAATT
Avena sativa genome assembly, chromosome: 6C.
OU342390.1:39423800-39423818
GTTAGGTAGCAGCGTGAGTACGTAGTATTT39423800CTCTCTGCAGCTAGCTAGCATGTGAAAAATAATCCGACGACATTTAATT
Avena sativa genome assembly, chromosome: 13.
OV702291.1:41609435-41609453
GTTAGGTAGCAGCGTGAGTACGTAGTATTT41609435CTCTCTGCAGCTAGCTAGCATGTGAAAAATAATCCGACGACATTTAATT
Hordeum bulbosum genome assembly, chromosome: 1H_1.
OY737640.1:250053243-250053261
TTCACTATTTGTGCGAAGAAAGCTTCGCCT250053243CTCTCTGCAGCTAGCTAGCCGATGTATCCAGCCTTCAATGTTTCGGGTA
Sphagnum tenellum genome assembly, chromosome: 2.
OY998143.1:5331819-5331837
CACGTATCAACATCGGTCTAACAACAGGCA5331819CTCTCTGCAGCTAGCTAGCTAGTTACCTGCACACAAAAACACAAGACTG
Daphnia pulex isolate KAP106 chromosome 5.
CP087231.1:7954511-7954529
TGACGTGATCCATCAGCTATCAATCACCAT7954511CTCTCTGCAGCTAGCTAGCTTTCTCTCTCAACGGCCTCAACCCTACACG
Daphnia pulex isolate KAP4 chromosome 5.
CP087243.1:8278825-8278843
TGACGTGATCCATCAGCTATCAATCACCAT8278825CTCTCTGCAGCTAGCTAGCTTGCTCTTTCAACGGCCTACAACCCTACAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTAGCTAGCTGCAGAGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTAGCTAGCTGCAGAGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.228 | 0.219 | search_plus_done; http://172.18.8.135:50400/match?q=GCTAGCTAGCTGCAGAGAG&k=0&no_gap=0&offset=0&limit=50
0.376 | 0.148 | search_minus_done; http://172.18.8.135:50400/match?q=CTCTCTGCAGCTAGCTAGC&k=0&no_gap=0&offset=0&limit=12
0.390 | 0.015 | cgi_end;

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