GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-05 02:57:56, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

PU3_plate42_M17 PU3 Prunus persica cDNA similar to similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] contains InterProScan IPR000315: Zn-finger, B-box, mRNA sequence.
DY647237.1:274-292
CGAGCTTTGCTCTGTAGAACATGTGATGTT274GCTATACACGCTGCTAATAGCTTGGTGTCAGCTCACCGGAGGTTTTTGC
Pm_0449 Fruits and flowers of Prunus mume cv. Xiyeqing Prunus mume cDNA, mRNA sequence.
GW869023.1:309-327
CGAGCTTTGCTCTGTAGAACATGTGATGTT309GCTATACACGCTGCTAATAGCTTGGTGTCAGCTCACCGGAGGTTTTTGC
Prunus dulcis DNA, pseudomolecule Pd04.
AP019300.1:9232369-9232387
AGAGCTTTGCTCTGTAGAACATGTGATGTT9232369GCTATACACGCTGCTAATAGCTTGGTGTCAGCTCACCGGAGGTTTTTGC
Prunus mume strain hongmei clone P05 SSR marker genomic sequence.
GU458006.1:1-19
1GCTATACACGCTGCTAATAACAACAGGATGTAGCATGGTCATCTGGAGT
Prunus mume strain hongmei clone P06 SSR marker genomic sequence.
GU458007.1:1-19
1GCTATACACGCTGCTAATAACAACAGGATGTAGCATGGTCATCTGGAGT
Prunus persica light-regulated zinc finger protein 1 (LZF1) mRNA, partial cds.
JQ732178.1:9-27
GTGATGTT9GCTATACACGCTGCTAATAGCTTGGTGTCAGCTCACCGGAGGTTTTTGC
Prunus dulcis genome assembly, chromosome: 4.
OZ022200.1:10386390-10386408
CGAGCTTTGCTCTGTAGAACATGTGATGTT10386390GCTATACACGCTGCTAATAGCTTGGTGTCAGCTCACCGGAGGTTTTTGC
Prunus dulcis genome assembly, chromosome: 4.
OZ022209.1:10558970-10558988
CGAGCTTTGCTCTGTAGAACATGTGATGTT10558970GCTATACACGCTGCTAATAGCTTGGTGTCAGCTCACCGGAGGTTTTTGC
Prunus armeniaca genome assembly, chromosome: 4.
OZ046363.2:10306540-10306558
CGAGCTTTGCTCTGTAGAACATGTGATGTT10306540GCTATACACGCTGCTAATAGCTTGGTGTCAGCTCACCGGAGGTTTTTGC
Prunus padus genome assembly, chromosome: 12.
OZ060522.1:9228514-9228532
CGAGCTTTGCTCTGTAGAACATGTGATGTT9228514GCTATACACGCTGCTAATAGCTTGGTGTCAGCTCACCGGAGGTTTTTGC
Prunus armeniaca genome assembly, chromosome: 4.
OZ177840.1:9864097-9864115
CGAGCTTTGCTCTGTAGAACATGTGATGTT9864097GCTATACACGCTGCTAATAGCTTGGTGTCAGCTCACCGGAGGTTTTTGC
Prunus brigantina genome assembly, chromosome: 4.
OZ184545.1:10322665-10322683
CGAGCTTTGCTCTGTAGAACATGTGATGTT10322665GCTATACACGCTGCTAATAGCTTGGTGTCAGCTCACCGGAGGTTTTTGC
Prunus ramburei genome assembly, chromosome: 5.
OZ234814.1:11796791-11796809
CGAGCTTTGCTCTGTAGAACATGTGATGTT11796791GCTATACACGCTGCTAATAGCTTGGTGTCAGCTCACCGGAGGTTTTTGC
Hemaris fuciformis genome assembly, chromosome: 21.
OU015452.1:9303919-9303937
GACCGCATTTTATTTGTCATGAAATCGGTG9303919TATTAGCAGCGTGTATAGCTATGAAACACTGTGCTAAATGTTTTTTATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTATACACGCTGCTAATA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTATACACGCTGCTAATA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.475 | 0.466 | search_plus_done; http://172.18.8.135:50900/match?q=GCTATACACGCTGCTAATA&k=0&no_gap=0&offset=0&limit=50
0.668 | 0.194 | search_minus_done; http://172.18.8.135:50900/match?q=TATTAGCAGCGTGTATAGC&k=0&no_gap=0&offset=0&limit=37
0.669 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).