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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:34:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

PU3_plate42_M17 PU3 Prunus persica cDNA similar to similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] contains InterProScan IPR000315: Zn-finger, B-box, mRNA sequence.
DY647237.1:274-292
CGAGCTTTGCTCTGTAGAACATGTGATGTT274GCTATACACGCTGCTAATAGCTTGGTGTCAGCTCACCGGAGGTTTTTGC
Pm_0449 Fruits and flowers of Prunus mume cv. Xiyeqing Prunus mume cDNA, mRNA sequence.
GW869023.1:309-327
CGAGCTTTGCTCTGTAGAACATGTGATGTT309GCTATACACGCTGCTAATAGCTTGGTGTCAGCTCACCGGAGGTTTTTGC
Prunus dulcis DNA, pseudomolecule Pd04.
AP019300.1:9232369-9232387
AGAGCTTTGCTCTGTAGAACATGTGATGTT9232369GCTATACACGCTGCTAATAGCTTGGTGTCAGCTCACCGGAGGTTTTTGC
Prunus mume strain hongmei clone P05 SSR marker genomic sequence.
GU458006.1:1-19
1GCTATACACGCTGCTAATAACAACAGGATGTAGCATGGTCATCTGGAGT
Prunus mume strain hongmei clone P06 SSR marker genomic sequence.
GU458007.1:1-19
1GCTATACACGCTGCTAATAACAACAGGATGTAGCATGGTCATCTGGAGT
Prunus persica light-regulated zinc finger protein 1 (LZF1) mRNA, partial cds.
JQ732178.1:9-27
GTGATGTT9GCTATACACGCTGCTAATAGCTTGGTGTCAGCTCACCGGAGGTTTTTGC
Hemaris fuciformis genome assembly, chromosome: 21.
OU015452.1:9303919-9303937
GACCGCATTTTATTTGTCATGAAATCGGTG9303919TATTAGCAGCGTGTATAGCTATGAAACACTGTGCTAAATGTTTTTTATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTATACACGCTGCTAATA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTATACACGCTGCTAATA | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.422 | 0.414 | search_plus_done; http://172.18.8.135:50400/match?q=GCTATACACGCTGCTAATA&k=0&no_gap=0&offset=0&limit=50
0.526 | 0.104 | search_minus_done; http://172.18.8.135:50400/match?q=TATTAGCAGCGTGTATAGC&k=0&no_gap=0&offset=0&limit=44
0.527 | 0.001 | cgi_end;

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