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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-06 14:14:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Medicago arabica genome assembly, chromosome: 5.
OX326968.1:8217156-8217178
GGAAAACCATCACGCTCTTCAATTCCAGCG8217156GCTATTGTATCACGTAAACCCTGAATACCCTGATATAGAAATATGAACAGTTT
Trifolium dubium genome assembly, chromosome: 2.
OX638063.1:5015756-5015778
GGAAAACCATCACGTTCTTCAATTCCAGCG5015756GCTATTGTATCACGTAAACCCTGAATACCCTGATATGGAAATATGAACAATTT
Trifolium dubium genome assembly, chromosome: 12.
OX638073.1:4028812-4028834
GGAAAACCATCACGCTCTTCAATTCCAGCG4028812GCTATTGTATCACGTAAACCCTGAATACCCTGATATGGAAATATGAATAATTT
EST391615 GVN Medicago truncatula cDNA clone pGVN-30L14, mRNA sequence.
AW980462.1:459-481
ACTGGTGCCTATAGTCATAGTCAGGGTATT459CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
EST396620 KV0 Medicago truncatula cDNA clone pKV0-13F3, mRNA sequence.
BE203944.1:322-344
ACTGGTGCCTATAGTCATAGTCAGGGTATT322CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
EST396888 KV0 Medicago truncatula cDNA clone pKV0-14H12, mRNA sequence.
BE204212.1:476-498
ACTGGTGCCTATAGTCATAGTCAGGGTATT476CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
EST396889 KV0 Medicago truncatula cDNA clone pKV0-14H14, mRNA sequence.
BE204213.1:432-454
ACTGGTGCCTATAGTCATAGTCAGGGTATT432CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
NF045H09EC1F1079 Elicited cell culture Medicago truncatula cDNA clone NF045H09EC 5', mRNA sequence.
BF648433.1:457-479
ACTGGTGCCTATAGTCATAGTCAGGGTATT457CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
NF118B01ST1F1011 Developing stem Medicago truncatula cDNA clone NF118B01ST 5', mRNA sequence.
BG447604.1:271-293
ACTGGTGCCTATAGTCATAGTCAGGGTATT271CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
NF034H05ST1F1000 Developing stem Medicago truncatula cDNA clone NF034H05ST 5', mRNA sequence.
BG447630.1:527-549
ACTGGTGCCTATAGTCATAGTCAGGGTATT527CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
NF095G02LF1F1017 Developing leaf Medicago truncatula cDNA clone NF095G02LF 5', mRNA sequence.
BG453886.1:448-470
ACTGGTGCCTATAGTCATAGTCAGGGTATT448CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
EST507852 KV3 Medicago truncatula cDNA clone pKV3-48J16 5' end, mRNA sequence.
BG646233.1:527-549
ACTGGTGCCTATAGTCATAGTCAGGGTATT527CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
NF089F10IN1F1091 Insect herbivory Medicago truncatula cDNA clone NF089F10IN 5', mRNA sequence.
BI265855.1:462-484
ACTGGTGCCTATAGTCATAGTCAGGGTATT462CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGNNTNAC
NF103A12IN1F1097 Insect herbivory Medicago truncatula cDNA clone NF103A12IN 5', mRNA sequence.
BI266325.1:429-451
ACTGGTGCCTATAGTCATAGTCAGGGTATT429CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
NF101B09IN1F1077 Insect herbivory Medicago truncatula cDNA clone NF101B09IN 5', mRNA sequence.
BI267295.1:463-485
ACTGGTGCCTATAGTCATAGTCAGGGTATT463CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
NF012A09NR1F1000 Nodulated root Medicago truncatula cDNA clone NF012A09NR 5', mRNA sequence.
BQ137464.1:307-329
ACTGGTGCCTATAGTCATAGTCAGGGTATT307CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
EST647420 HOGA Medicago truncatula cDNA clone HOGA-31H14, mRNA sequence.
CB894628.1:262-284
ACTGGTGCCTATAGTCATAGTCAGGGTATT262CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
EST647707 HOGA Medicago truncatula cDNA clone HOGA-32L20, mRNA sequence.
CB894915.1:377-399
ACTGGTGCCTATAGTCATAGTCAGGGTATT377CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
s13dNF54B02AT025_517144 Aphid-Infected Shoots Medicago truncatula cDNA, mRNA sequence.
CX528316.1:438-460
ACTGGTGCCTATAGTCATAGTCAGGGTATT438CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
s13dNF51D12MJ095_245696 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence.
CX529826.1:451-473
ACTGGTGCCTATAGTCATAGTCAGGGTATT451CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
s13dNF80D09MJ074_257247 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence.
CX531651.1:431-453
ACTGGTGCCTATAGTCATAGTCAGGGTATT431CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
s13dNF0CA01MJ001_319387 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence.
CX533111.1:447-469
ACTGGTGCCTATAGTCATAGTCAGGGTATT447CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
s13dNF0KB03MJ025_320454 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence.
CX533651.1:457-479
ACTGGTGCCTATAGTCATAGTCAGGGTATT457CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
s13dNF0KB03MJ025_322381 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence.
CX534312.1:457-479
ACTGGTGCCTATAGTCATAGTCAGGGTATT457CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
AC3930 NOLLY Medicago truncatula cDNA 5', mRNA sequence.
DY617760.1:35-57
ACTGGTGCCTATAGTCATAGTCAGGGTATT35CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
MTYEX93TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence.
EV262621.1:564-586
ACTGGTGCCTATAGTCATAGTCAGGGTATT564CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
MEUAO42TF JCVI-MT2 Medicago truncatula cDNA 5', mRNA sequence.
GE345454.1:412-434
ACTGGTGCCTATAGTCATAGTCAGGGTATT412CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
METBU68TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
GT137079.1:471-493
ACTGGTGCCTATAGTCATAGTCAGGGTATT471CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
Medicago truncatula clone mth2-30n15, complete sequence.
AC151666.15:49738-49760
AAACTGTTCATATTTCCATATCAGGGTATT49738CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
Medicago truncatula chromosome 8 clone mth2-50p19, complete sequence.
AC157534.12:49738-49760
AAACTGTTCATATTTCCATATCAGGGTATT49738CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
Medicago truncatula clone mth2-58c24, complete sequence.
AC225502.9:63313-63335
AAACTGTTCATATTTCCATATCAGGGTATT63313CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
Medicago truncatula clone MTYFL_FM_FN_FO1G-O-18 unknown mRNA.
BT053200.1:564-586
ACTGGTGCCTATAGTCATAGTCAGGGTATT564CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC
Medicago truncatula clone JCVI-FLMt-12J19 unknown mRNA.
BT140109.1:564-586
ACTGGTGCCTATAGTCATAGTCAGGGTATT564CAGGGTTTACGTGATACAATAGCCGCTGGAATTGAAGAGCGTGATGGTTTTCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTATTGTATCACGTAAACCCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTATTGTATCACGTAAACCCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.345 | 0.337 | search_plus_done; http://172.18.8.135:50400/match?q=GCTATTGTATCACGTAAACCCTG&k=0&no_gap=0&offset=0&limit=50
1.341 | 0.996 | search_minus_done; http://172.18.8.135:50400/match?q=CAGGGTTTACGTGATACAATAGC&k=0&no_gap=0&offset=0&limit=47
1.360 | 0.019 | cgi_end;

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