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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 02:44:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-9071 Pericarp Coffea canephora cDNA clone cccp7j1 5', mRNA sequence.
DV673139.1:396-422
GTGGCCTATGTATTATGTACAATGGTGACT396AAGAGGTATGTATTGGTTTGGTTGAGCTCAATTTGGTACATTTGAAGGTTGCAAAAA
CGN-11587 Pericarp Coffea canephora cDNA clone cccp22i16 5', mRNA sequence.
DV674857.1:396-422
GTGGCCTATGTATTATGTACAATGGTGACT396AAGAGGTATGTATTGGTTTGGTTGAGCTCAATTTGGTACATTTGAAGGTTGCAAANN
TransId-273308 CarCatLeEnri2 Coffea arabica cDNA clone CarCatLeEnri2_52-G01-PAL17d similar to Casein kinase - Beta vulgaris (Sugar beet), mRNA sequence.
GT018114.1:571-597
GTGGCCTATGTATTATGTACAATGGTGACT571AAGAGGTATGTATTGGTTTGGTTGAGCTCAATTTGGTACATTTGAAGGTTGCAGCAC
TransId-275596 CarCatLeEnri2 Coffea arabica cDNA clone CarCatLeEnri2_78-A10-PAL17d similar to Casein kinase - Beta vulgaris (Sugar beet), mRNA sequence.
GT018958.1:571-597
GTGGCCTATGTATTATGTACAATGGTGACT571AAGAGGTATGTATTGGTTTGGTTGAGCTCAATTTGGTACATTTGAAGGTTGCAGCAC
TransId-275608 CarCatLeEnri2 Coffea arabica cDNA clone CarCatLeEnri2_78-B10-PAL17d similar to Casein kinase - Beta vulgaris (Sugar beet), mRNA sequence.
GT018964.1:571-597
GTGGCCTATGTATTATGTACAATGGTGACT571AAGAGGTATGTATTGGTTTGGTTGAGCTCAATTTGGTACATTTGAAGGTTGCAGCAC
TransId-277570 CarCatBudEnri2 Coffea arabica cDNA clone CarCatBudEnri2_40-G01-PAL17d similar to Protein kinase - Medicago truncatula (Barrel medic), mRNA sequence.
GT019664.1:662-688
GTGGCCTATGTATTATGTACAATGGTGACT662AAGAGGTATGTATTGGTTTGGTTGAGCTCAATTTGGTACATTTGAAGGTTGCAGCAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTCAACCAAACCAATACATACCTCTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTCAACCAAACCAATACATACCTCTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.381 | 0.372 | search_plus_done; http://172.18.8.135:50400/match?q=GCTCAACCAAACCAATACATACCTCTT&k=0&no_gap=0&offset=0&limit=50
1.017 | 0.636 | search_minus_done; http://172.18.8.135:50400/match?q=AAGAGGTATGTATTGGTTTGGTTGAGC&k=0&no_gap=0&offset=0&limit=50
1.021 | 0.004 | cgi_end;

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