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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:00:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Myotis daubentonii genome assembly, chromosome: 3.
OY725361.1:855804-855821
AAGTCCCACCCAGCTGTTTGCACGGCTGGG855804GCTCACCGCCCCCCATCTGAACAGCACAGCCACACCCCACCCGCCCCT
Furcifer pardalis isolate Fpa_1 chromosome 2.
CP126891.1:120910724-120910741
CCCCACCTGGGCTTGCCATCGCCTGCCTAG120910724GCTCACCGCCCCCCATCTAGGCACTCAAATTCAAAATGCTACCGTGGT
Furcifer pardalis isolate Fpa_1 chromosome 3.
CP126892.1:14228412-14228429
CACAGGCCAAACTCACCGGCCCCCATCTAG14228412GCTCACCGCCCCCCATCTAGGCTTTCCACCACCACCGCAGCACCTGTC
Furcifer pardalis isolate Fpa_1 chromosome 6.
CP126895.1:57915520-57915537
GGGCGCCGGCCAAACTCACCGCTCCCTTAG57915520GCTCACCGCCCCCCATCTAGACACTCAAATCAAGATGAAAGTCCTACC
Balaenoptera acutorostrata genome assembly, chromosome: 6.
OX465356.1:123312332-123312349
TCCTGGCTGAAGGGTGCTTTTGTGACTGAC123312332AGATGGGGGGCGGTGAGCAGCCCCTCTTTTCTCGGGGACTTTGGTTTT
Furcifer pardalis isolate Fpa_1 chromosome 1.
CP126890.1:4958761-4958778
TGGAGCAAGCCTAGATGGGGCAGTGAACCT4958761AGATGGGGGGCGGTGAGCCTAGAGGGGGGATGAGTTTGGCCTGCACCC
Furcifer pardalis isolate Fpa_1 chromosome 1.
CP126890.1:142610819-142610836
CTGACAGCCCTACGTCAAGTGAAGCTGCCT142610819AGATGGGGGGCGGTGAGCCTAGATACGGGGCAGTGAGCCTAGAGGGAG
Furcifer pardalis isolate Fpa_1 chromosome 2.
CP126891.1:271026200-271026217
AGCAATTCCTTTCCACCTACAATGAGAGAA271026200AGATGGGGGGCGGTGAGCACAATCCCAGGCACGCCTGCTTGGAAGACA
Furcifer pardalis isolate Fpa_1 chromosome 6.
CP126895.1:31130780-31130797
ACTGCAGTAGCATTATGGATATGAGTGCCT31130780AGATGGGGGGCGGTGAGCCTAGGCGGGGGGCGGCGAGCCTAAGAGGGG
Streptomyces sp. NBC_00101 chromosome, complete genome.
CP108217.1:196991-197008
TTCAGGCGTCCCCGGGAGAAGAGGTCGGAC196991AGATGGGGGGCGGTGAGCGTCACGTCGTCGGGCATGGGCGTCAGCCTC
Streptomyces sp. NBC_01218 chromosome, complete genome.
CP108536.1:216676-216693
TTCAGGCGTCCCCGGGAGAAGAGGTCGGAC216676AGATGGGGGGCGGTGAGCGTCACGTCGTCGGGCATGGGCGTCAGCCTC
Streptomyces sp. AM 2-1-1 chromosome, complete genome.
CP119147.1:211369-211386
TTCAGGCGTCCCCGGGAGAAGAGGTCGGAC211369AGATGGGGGGCGGTGAGCGTCACGTCGTCGGGCATGGGCGTCAGCCTC
Anisus vortex genome assembly, chromosome: 3.
OX421494.1:13866806-13866823
TTTAATTAACAAATGTTTCCGCTAAAATAA13866806AGATGGGGGGCGGTGAGCGGAAAAAAATTGTAAAAGGGGCCGGTGAGC
Anisus vortex genome assembly, chromosome: 17.
OX421508.1:19035998-19036015
AGGGGGGAGTGGGAGCTAAAAAAAATTCGG19035998AGATGGGGGGCGGTGAGCGGGAAAAAATTGTAAAAGGGGGCGGTGAGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTCACCGCCCCCCATCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTCACCGCCCCCCATCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.180 | 0.171 | search_plus_done; http://172.18.8.135:50400/match?q=GCTCACCGCCCCCCATCT&k=0&no_gap=0&offset=0&limit=50
0.276 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=AGATGGGGGGCGGTGAGC&k=0&no_gap=0&offset=0&limit=46
0.283 | 0.007 | cgi_end;

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