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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-03-25 18:18:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Lotus japonicus cDNA, clone:MFBL016c02_f, 3' end.
BP042051.1:102-121
GTTCACATTAATTCACACTTGGCTTTCCCA102GCTCCAGAGAGAGGAGCAAACATAAACAAAAATATCTATTTATATGAACA
Glycine max cDNA clone: GMFL01-37-G11, 3'end.
BW674262.1:113-132
TCTGTTCACATTCACACCTCAACCTTCACA113GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
EST1474 tepary bean Root cDNA Phaseolus acutifolius cDNA clone LR-0173 similar to putative carboxyl-terminal peptidase [Arabidopsis thaliana], mRNA sequence.
DV643068.1:50-69
TCTGTTCACATTCACACCTTAGCCTTCACA50GCTCCAGAGAGAGGAGCAAACAAAACAACAAATATATATATATTWTTAGG
UCRVU05_CCNN1882_g1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 Vigna unguiculata cDNA clone CCNN1882.g1, mRNA sequence.
FG836832.1:130-149
CCATAACAGAATATTCTGTTCACATTCACA130GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATTTATATATATTTAT
UCRVU07_CCNP6399_g1 Cowpea UCR 779 Mixed Tissue and Conditions cDNA Library UCRVU07-1-2 Vigna unguiculata cDNA clone CCNP6399.g1, mRNA sequence.
FG869945.1:48-67
CCATAACAGAATATTCTGTTCACATTCACA48GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATTTATATATATTTAT
UCRVU08_CCNS2657_g1 Cowpea IT97K-461-4 Mixed Tissue and Conditions cDNA Library UCRVU08-1-2 Vigna unguiculata cDNA clone CCNS2657.g1, mRNA sequence.
FG903070.1:44-63
TTTTAACAGAATATTCTGTTCACATTCACA44GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATTTATATATATTTAT
UCRVU09_CCNT3923_g1 Cowpea UCR 707 Mixed Tissue and Conditions cDNA Library UCRVU09-1-2 Vigna unguiculata cDNA clone CCNT3923.g1, mRNA sequence.
FG920140.1:89-108
CCATAACAGAATATTCTGTTCACATTCACA89GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATTTATATATATTTAT
UCRVU09_CCNT10299_g1 Cowpea UCR 707 Mixed Tissue and Conditions cDNA Library UCRVU09-1-2 Vigna unguiculata cDNA clone CCNT10299.g1, mRNA sequence.
FG929718.1:127-146
CCATAACAGAATATTCTGTTCACATTCACA127GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATTTATATATATTTAT
454GmaGlobSeed404 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK265772.1:65-84
TCTGTTCACATTCACACCTCAACCTTCACA65GCTCCAGAGAGAGGAGCAAACAA
454GmaGlobSeed11351 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK276719.1:28-47
GTTCACATTCACACCTCAACCTTCACA28GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed26864 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK292232.1:66-85
TCTGTTCACATTCACACCTCAACCTTCACA66GCTCCAGAGAGAGGAGCAAACAA
454GmaGlobSeed29614 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK294982.1:71-90
TCTGTTCACATTCACACCTCAACCTTCACA71GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed34458 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK299826.1:56-75
TCTGTTCACATTCACACCTCAACCTTCACA56GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed35128 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK300496.1:45-64
TCTGTTCACATTCACACCTCAACCTTCACA45GCTCCAGAGAGAGGAGCAAACAAAAACAAC
454GmaGlobSeed35255 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK300623.1:56-75
TCTGTTCACATTCACACCTCAACCTTCACA56GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed35692 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK301060.1:69-88
TCTGTTCACATTCACACCTCAACCTTCACA69GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed41532 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK306900.1:34-53
TCTGTTCACATTCACACCTCAACCTTCACA34GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed42235 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK307603.1:67-86
TCTGTTCACATTCACACCTCAACCTTCACA67GCTCCAGAGAGAGGAGCAAAACAAAAACAACAAATATATATAATATAAAC
454GmaGlobSeed42834 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK308202.1:34-53
TCTGTTCACATTCACACCTCAACCTTCACA34GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed43198 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK308566.1:65-84
TCTGTTCACATTCACACCTCAACCTTCACA65GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed47686 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK313054.1:69-88
TCTGTTCACATTCACACCTCAACCTTCACA69GCTCCAGAGAGAGGAGCAAAACAAAAACAACAAATATATATAATATAAAC
454GmaGlobSeed47691 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK313059.1:34-53
TCTGTTCACATTCACACCTCAACCTTCACA34GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed50014 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK315382.1:43-62
GTTAACAACATTCACACCTCAACCTTCACA43GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed52603 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK317971.1:72-91
TCTGTTCACATTCACACCTCAACCTTCACA72GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed53476 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK318844.1:68-87
TCTGTTCACATTCACACCTCAACCTTCACA68GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed54267 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK319635.1:34-53
TCTGTTCACATTCACACCTCAACCTTCACA34GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed65328 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK330696.1:69-88
TCTGTTCACATTCACACCTCAACCTTCACA69GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed65771 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK331139.1:126-145
TCTGTTCACATTCACACCTCGACCTTCACA126GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATATAAT
454GmaGlobSeed66237 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK331605.1:49-68
TCTGTTCACATTCACACCTCAACCTTCACA49GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATAATAAAC
454GmaGlobSeed90020 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK355388.1:67-86
TCTGTTCACATTCACACCTCAACCTTCACA67GCTCCAGAGAGAGGAGCAAAACAAAAACAACAAATATATATAAT
454GmaGlobSeed111643 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK377011.1:70-89
TCTGTCCACATTCACACCTCAACCTTCACA70GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATAATAATATAAAC
454GmaGlobSeed117841 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK383209.1:78-97
TCTGTTCACATTCACACCTCAACCTTCACA78GCTCCAGAGAGAGGAGCAAACAAAACAACAAATATATATAATATAAACAG
454GmaGlobSeed117865 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK383233.1:36-55
TGTTCACATTCACACCTCAACCTTTCTACA36GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed120831 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK386199.1:73-92
TCTGTTCACATTCACACCTCAACCTTCACA73GCTCCAGAGAGAGGAGCAAAACAAAAACAACAAATATATATAATATAAAC
454GmaGlobSeed121114 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK386482.1:73-92
TCTGTTCACATTCACACCTCAACCTTCACA73GCTCCAGAGAGAGGAGCAAAACAAAAACAACAAATATATATAATATAAAA
454GmaGlobSeed123257 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK388625.1:32-51
CTGTTCACATTTCACACCTCAACCTTCACA32GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed124523 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK389891.1:69-88
TCTGTTCACATTCACACCTCAACCTTCACA69GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed127356 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK392724.1:66-85
TCTGTTCACATTCACACCTCAACCTTCACA66GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed131034 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK396402.1:67-86
TCTGTTCACATTCACACCTCAACCTTCACA67GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed132263 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK397631.1:68-87
TCTGTTCACATTCACACCTCAACCTTCACA68GCTCCAGAGAGAGGAGCAAAACAAAAACAACAAATATATATAAATATAAA
454GmaGlobSeed132782 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK398150.1:127-146
TCTGTTCACATTCACACCTCAACCTTCACA127GCTCCAGAGAGAGGAGCAAACAAAACAACAAATATATATAATATAAACAG
454GmaGlobSeed134406 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK399774.1:72-91
TCTGTTCACATTCACACCTCAACCTTCACA72GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed135705 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK401073.1:130-149
TCTGTTCACATTCACACCTCAACCTTCACA130GCTCCAGAGAGAGGAGCAAACAAAACAACAAATATATATAATATAAACAG
454GmaGlobSeed170749 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK436117.1:58-77
TCTGTTCACATTCACACCTCAACCTTCACA58GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed174948 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK440316.1:59-78
TCTGTTCACATTCACACCTCAACCTTCACA59GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed180157 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK445525.1:52-71
TCTGTTCACATTCACACCTCAACCTTCACA52GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed198315 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK463683.1:80-99
TCTGTTCACATTCACACCTCAACCTTCACA80GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed218976 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK484344.1:2-21
A2GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
454GmaGlobSeed221800 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK487168.1:95-114
TCTGTTCACATTCACACCTCAACCTTCACA95GCTCCAGAGAGAGGAGCAAAACAAAAAACAACAAATATATATAATATAAA
454GmaGlobSeed222343 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK487711.1:41-60
TCTGTTCACATTCACACCTCAACCTTCACA41GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
GF_Ba055P13.R GF_Ba Glycine falcata genomic 3', genomic survey sequence.
HR138948.1:270-289
TCTGTTCACATTCTCACCTCAACCTTCACA270GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATATAAT
Lotus japonicus genomic DNA, clone: LjT19N22, TM1310.
AP010182.1:15031-15050
GTTCACATTAATTCACACTTTGCTTTCCCA15031GCTCCAGAGAGAGGAGCAAACATAAACAAAAATATCTATTTATATGAACA
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:15936805-15936824
GTTCACATTAATTCACACTTTGCTTTCCCA15936805GCTCCAGAGAGAGGAGCAAACATAAACAAAAATATCTATTTATATGAACA
Vigna unguiculata cultivar Xiabao 2 chromosome Vu06.
CP039345.1:2280265-2280284
ACATAACAGTATATTCTGTTCACATTCACA2280265GCTCCAGAGAGAGGAGCAAACAAAAACAACAAAATATATATTTATATAAA
Glycine max cultivar Williams 82 chromosome 15.
CP126440.1:53714041-53714060
TCTGTTCACATTCACACCTCAACCTTCACA53714041GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATATATAATATAAACA
Sphenostylis stenocarpa genome assembly, chromosome: 5.
OY731402.1:53236024-53236043
TGTTCACATTCACACCTCAGCTTTCATATA53236024GCTCCAGAGAGAGGAGCAAACAAAAACAACAAATATTTATATATATAAAC
Sphagnum tenellum genome assembly, chromosome: 18.
OY998159.1:4399648-4399667
CAAGGTCCAGAGAGAGGAGCAAGCGCTCAA4399648GCTCCAGAGAGAGGAGCAAACGCTCAAGGTCCAGAGAAAGCCTGGTTGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTCCAGAGAGAGGAGCAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTCCAGAGAGAGGAGCAAA | format : html | download : | debug :

0.008 | 0.008 | search_start;
3.556 | 3.548 | search_plus_done; http://172.18.8.135:50400/match?q=GCTCCAGAGAGAGGAGCAAA&k=0&no_gap=0&offset=0&limit=50
3.839 | 0.282 | search_minus_done; http://172.18.8.135:50400/match?q=TTTGCTCCTCTCTCTGGAGC&k=0&no_gap=0&offset=0&limit=0
3.839 | 0.000 | cgi_end;

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