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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 09:50:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

py128 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX873960.1:243-262
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA243GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
py147 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX873976.1:285-304
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA285GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
py20 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874015.1:286-305
GTCGTTGGCGTTGTTCGCGTGGTAGTCGTA286GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
py225 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874034.1:236-255
GTTGTTGGCGTAGTTCGCGTAGTAGTCGTA236GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
py411 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874193.1:295-314
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA295GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
py482 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874253.1:213-232
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA213GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
py544 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874309.1:335-354
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA335GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
py601 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874359.1:261-280
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA261GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
py615 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874368.1:241-260
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA241GCTCGAGCTCCAGTACACCTTGTCGTAGCAGTAGTCCTTGCCGTCCTTCT
py617 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874369.1:271-290
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA271GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
py643 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874391.1:234-253
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA234GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
py698 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874439.1:245-264
GTTGTAGGCGTAGTTCGCGTTGTTGTCGTA245GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
py703 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874444.1:237-256
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA237GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
py730 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874463.1:283-302
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA283GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
py772 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874497.1:242-261
GTTGTTGGCGTTGCTCGCGTTGTTGTCGTA242GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
py817 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874536.1:247-266
GTTGTTGGCGTTGTTCGCGTCGTTGTCGCA247GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
pyF10 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874576.1:308-327
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA308GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
pyF4 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874580.1:269-288
GTTGTTGGCATTGTTGGCGTTGTTGTCGTA269GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
myx0399 myx cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
DR907334.1:223-242
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA223GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
myx0412 myx cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
DR907470.1:219-238
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA219GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
myx0349 myx cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
DR907512.1:197-216
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA197GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
myx0367 myx cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
DR907514.1:228-247
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA228GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
myx0164 myx cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
DR907524.1:224-243
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA224GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
myx0101 myx cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
DR907545.1:213-232
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA213GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
myx0344 myx cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
DR907553.1:206-225
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA206GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
Neopyropia yezoensis microsatellite Py13740 sequence.
MW574012.1:150-169
GTTGTTGGCGTTGTTCGCGTTGTTGTCGTA150GCTCGAGCTCCAGTACACCTTGTAGTAGCAGTAGTCCTTGCCGTCCTTCT
Porphyra yezoensis cDNA, clone:PF010d09_r, 5'end.
AU187269.1:422-441
GCGAGGACCGCAAGGGCTACTGCTACTACA422AGGTGTACTGGAGCTCGAGCTACGACAACAACGACAACAACGACAACAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCTCGAGCTCCAGTACACCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTCGAGCTCCAGTACACCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.920 | 0.911 | search_plus_done; http://172.18.8.135:50400/match?q=GCTCGAGCTCCAGTACACCT&k=0&no_gap=0&offset=0&limit=50
0.972 | 0.052 | search_minus_done; http://172.18.8.135:50400/match?q=AGGTGTACTGGAGCTCGAGC&k=0&no_gap=0&offset=0&limit=24
0.973 | 0.001 | cgi_end;

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