GGGenome | Results

データベース：

ミスマッチ/ギャップを許容ミスマッチのみ許容：塩基まで (検索する配列長の25%まで)
双方向を検索＋方向のみ検索－方向のみ検索

2025-04-03 11:49:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 12 from patent US 8563805.
HJ498226.1:811-831

AGTGTTCCGTGGCTGTTCACCAAGCCAACC811GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Sequence 24 from patent US 8563805.
HJ498235.1:1313-1333

AGTGTTCCGTGGCTGTTCACCAAGCCAACC1313GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Sequence 43 from patent US 8563805.
HJ498253.1:1313-1333

AGTGTTCCGTGGCTGTTCACCAAGCCAACC1313GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Sequence 51 from patent US 8563805.
HJ498261.1:1313-1333

AGTGTTCCGTGGCTGTTCACCAAGCCAACC1313GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Sequence 12 from patent US 9580723.
KH601206.1:811-831

AGTGTTCCGTGGCTGTTCACCAAGCCAACC811GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Sequence 24 from patent US 9580723.
KH601215.1:1313-1333

AGTGTTCCGTGGCTGTTCACCAAGCCAACC1313GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Sequence 43 from patent US 9580723.
KH601233.1:1313-1333

AGTGTTCCGTGGCTGTTCACCAAGCCAACC1313GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Sequence 51 from patent US 9580723.
KH601241.1:1313-1333

AGTGTTCCGTGGCTGTTCACCAAGCCAACC1313GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Sequence 12 from patent US 10227602.
MM770333.1:811-831

AGTGTTCCGTGGCTGTTCACCAAGCCAACC811GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Sequence 24 from patent US 10227602.
MM770342.1:1313-1333

AGTGTTCCGTGGCTGTTCACCAAGCCAACC1313GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Sequence 43 from patent US 10227602.
MM770360.1:1313-1333

AGTGTTCCGTGGCTGTTCACCAAGCCAACC1313GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Sequence 51 from patent US 10227602.
MM770368.1:1313-1333

AGTGTTCCGTGGCTGTTCACCAAGCCAACC1313GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Sequence 12 from patent US 11359205.
OO278218.1:811-831

AGTGTTCCGTGGCTGTTCACCAAGCCAACC811GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Sequence 24 from patent US 11359205.
OO278227.1:1313-1333

AGTGTTCCGTGGCTGTTCACCAAGCCAACC1313GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Sequence 43 from patent US 11359205.
OO278245.1:1313-1333

AGTGTTCCGTGGCTGTTCACCAAGCCAACC1313GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Sequence 51 from patent US 11359205.
OO278253.1:1313-1333

AGTGTTCCGTGGCTGTTCACCAAGCCAACC1313GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfr3002e19.y1 Mdfr Malus domestica cDNA clone Mdfr3002e19 5' similar to TR:O81103 O81103 POLYPHENOL OXIDASE PRECURSOR, mRNA sequence.
CN994154.2:103-123

AGTGTTCCGTGGCTGTTCACCAAGCCAACC103GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfr3002c04.y1 Mdfr Malus domestica cDNA clone Mdfr3002c04 5' similar to TR:O81103 O81103 POLYPHENOL OXIDASE PRECURSOR, mRNA sequence.
CN994221.2:160-180

AGTGTTCCGTGGCTGTTCACCAAGCCAACC160GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfr3009a23.y2 Mdfr Malus domestica cDNA clone Mdfr3009a23 5' similar to TR:O81103 O81103 POLYPHENOL OXIDASE PRECURSOR, mRNA sequence.
CO415814.1:366-386

AGTGTTCCGTGGCTGTTCACCAAGCCAACC366GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfr3008m10.y3 Mdfr Malus domestica cDNA clone Mdfr3008m10 5' similar to TR:O81103 O81103 POLYPHENOL OXIDASE PRECURSOR, mRNA sequence.
CO416675.1:201-221

AGTGTTCCGTGGCTGTTCACCAAGCCAACC201GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfr3008l17.y3 Mdfr Malus domestica cDNA clone Mdfr3008l17 5' similar to TR:O81103 O81103 POLYPHENOL OXIDASE PRECURSOR, mRNA sequence.
CO416753.1:189-209

AGTGTTCCGTGGCTGTTCACTAAGCCAACC189GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfr3019n08.y1 Mdfr Malus domestica cDNA clone Mdfr3019n08 5' similar to TR:O81103 O81103 POLYPHENOL OXIDASE PRECURSOR, mRNA sequence.
CO722447.1:194-214

AGTGTTCCGTGGCTGTTCACCAAGCCAACC194GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfr3025j22.y1 Mdfr Malus domestica cDNA clone Mdfr3025j22 5' similar to TR:O81103 O81103 POLYPHENOL OXIDASE PRECURSOR, mRNA sequence.
CO752882.1:121-141

AGTGTTCCGTGGCTGTTCACCAAGCCAACC121GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfr3020n22.y1 Mdfr Malus domestica cDNA clone Mdfr3020n22 5' similar to TR:O81103 O81103 POLYPHENOL OXIDASE PRECURSOR, mRNA sequence.
CO754044.1:177-197

AGTGTTCCGTGGCTGTTCACCAAGCCAACC177GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfrt3044j10.y1 Mdfrt Malus domestica cDNA clone Mdfrt3044j10 5' similar to TR:O81103 O81103 POLYPHENOL OXIDASE PRECURSOR, mRNA sequence.
CO755799.1:14-34

CACCAAGCCAACC14GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfrt3058e03.y1 Mdfrt Malus domestica cDNA clone Mdfrt3058e03 5' similar to TR:O81103 O81103 POLYPHENOL OXIDASE PRECURSOR, mRNA sequence.
CO902468.1:21-41

GGCTGTTCACCAAGCCAACC21GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

010813AASB005503HT (AASB) Royal Gala 10 DAFB fruit Malus domestica cDNA clone AASB005503, mRNA sequence.
EB141473.1:137-157

AGTGTTCCGTGGCTGTTCACCAAGCCAACC137GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

010811AASB002119HT (AASB) Royal Gala 10 DAFB fruit Malus domestica cDNA clone AASB002119, mRNA sequence.
EB142019.1:287-307

AGTGTTCCGTGGCTGTTCACCAAGCCAACC287GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGCGGCTACCCAGCTG

fl_02A02_AD9 Md_fruit-leaf_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD254883.1:375-395

AGTGTTCCGTGGCTGTTCACCAAGCCAACC375GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGCGGCTACCCAGCTG

fl_08G05_BD12 Md_fruit-leaf_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD254956.1:375-395

AGTGTTCCGTGGCTGTTCACCAAGCCAACC375GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGCGGCTACCCAGCTG

fl_01D01_AD8 Md_fruit-leaf_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD255039.1:334-354

AGTGTTCCGTGGCTGTTCACCAAGCCAACC334GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGCGGCTACCCAGCTG

Mdfwb2093M21.g1 Apple_EST_Mdfwb Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO507129.1:229-249

AGTGTTCCGTGGCTGTTCACCAAGCCAACC229GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfwb2091G06.g1 Apple_EST_Mdfwb Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO507581.1:35-55

GAATTCCGTTGCTGTCGCACCTTGCCAACC35GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfwb2098O16.g2 Apple_EST_Mdfwb Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO508645.1:394-414

AGTGTTCCGTGGCTGTTCACCAAGCCAACC394GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfwf2085O19.g1 Apple_EST_Mdfwf Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO512225.1:307-327

AGTGTTCCGTGGCTGTTCACCAAGCCAACC307GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfrs3142E11.g1 Apple_EST_Mdfrs Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO519857.1:85-105

AGTGTTCCGTGGCTGTTCACCAAGCCAACC85GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfrs3139M12.g1 Apple_EST_Mdfrs Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO520755.1:118-138

AGTGTTCCGTGGCTGTTCACCAAGCCAACC118GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfrb3146F13.g1 Apple_EST_Mdfrb Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO521559.1:185-205

AGTGTTCCGTGGCTGTTCACCAAGCCAACC185GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfrb3149H11.g1 Apple_EST_Mdfrb Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO521913.1:185-205

AGTGTTCCGTGGCTGTTCACCAAGCCAACC185GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfrb3149K04.g1 Apple_EST_Mdfrb Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO521977.1:56-76

AGTGTTCCGTGGCTGTTCACCAAGCCAACC56GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfrb3147F12.g1 Apple_EST_Mdfrb Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO522602.1:375-395

AGTGTTCCGTGGCTGTTCACCAAGCCAACC375GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfrb3147F17.g1 Apple_EST_Mdfrb Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO522607.1:140-160

AGTGTTCCGTGGCTGTTCACCAAGCCAACC140GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGCGGCTACCCAGCTG

Mdfrg3153H05.g1 Apple_EST_Mdfrg Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO524686.1:62-82

AGTGTTCCGTGGCTGTTCACCAAGCCAACC62GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfrfu3508C21.g1 Apple_EST_Mdfrfu Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO534748.1:152-172

AGTGTTCCGTGGCTGTTCACCAAGCCAACC152GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfrjg3502K11.g2 Apple_EST_Mdfrjg Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO540322.1:208-228

AGTGTTCCGTGGCTGTTCACCAAGCCAACC208GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfrjg3503L05.g1 Apple_EST_Mdfrjg Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO540801.1:132-152

AGTGTTCCGTGGCTGTTCACCAAGCCAACC132GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfrjg3503P15.g1 Apple_EST_Mdfrjg Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO540871.1:249-269

AGTGTTCCGTGGCTGTTCACCAAGCCAACC249GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfrjg3506D09.g1 Apple_EST_Mdfrjg Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO541653.1:202-222

AGTGTTCCGTGGCTGTTCACCAAGCCAACC202GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfwb2097A22.g1 Apple_EST_Mdfwb Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO544604.1:203-223

AGTGTTCCGTGGCTGTTCACCAAGCCAACC203GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Mdfwb2097P09.g1 Apple_EST_Mdfwb Malus domestica cDNA 5' similar to gb|AAC28935.1| polyphenol oxidase precursor [Prunus armeniaca], mRNA sequence.
GO544931.1:228-248

AGTGTTCCGTGGCTGTTCACCAAGCCAACC228GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:43415567-43415587

AGTGTTCCGTGGCTGTTCACCAAGCCAACC43415567GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGCGGCTACCCAGCTG

Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:40035681-40035701

AGTGTTCTGTGGCTGTTCACCAAGCCAACC40035681GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGCGGCTACCCAGCTG

Malus x domestica polyphenol oxidase IIa (PPOIIa) gene, complete cds.
JQ388479.1:1696-1716

AGTGTTCCGTGGCTGTTCACCAAGCCAACC1696GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Eriobotrya japonica chloroplast polyphenol oxidase III (PPO3) mRNA, complete cds; nuclear gene for chloroplast product.
JX025011.1:1390-1410

AGTGTTCCGTGGCTGTTCACCAAGCCAACC1390GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGCGGCTACCCAGCTG

Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:43769739-43769759

AGTGTTCCGTGGCTGTTCACCAAGCCAACC43769739GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGCGGCTACCCAGCTG

Malus domestica genome assembly, chromosome: 5.
OU696681.1:43206565-43206585

AGTGTTCCGTGGCTGTTCACCAAGCCAACC43206565GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGCGGCTACCCAGCTG

Malus domestica genome assembly, chromosome: 5.
OU744546.1:42592850-42592870

AGTGTTCCGTGGCTGTTCACCAAGCCAACC42592850GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGCGGCTACCCAGCTG

Malus domestica genome assembly, chromosome: 5.
OU744957.1:43122718-43122738

AGTGTTCCGTGGCTGTTCACCAAGCCAACC43122718GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGGGGCTACCCAGCTG

Malus domestica genome assembly, chromosome: 5.
OU744995.1:44065458-44065478

AGTGTTCCGTGGCTGTTCACCAAGCCAACC44065458GCTCGTAAGCCAAAGAGCAAGACAAAAGCCAAGGTGGCGGCTACCCAGCTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

タブ区切りテキスト → 表示 | ダウンロード
エクセル等の表計算ソフトに直接コピペできます。
CSV形式 → 表示 | ダウンロード
エクセル等の表計算ソフトにて開くことができます。
BED形式 → リンク | ダウンロード
GFF形式 → リンク | ダウンロード
JSON形式 → リンク | ダウンロード

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTCGTAAGCCAAAGAGCAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTCGTAAGCCAAAGAGCAAG | format : html | download : | debug :

0.008 | 0.008 | search_start;
3.659 | 3.651 | search_plus_done; http://172.18.8.135:50400/match?q=GCTCGTAAGCCAAAGAGCAAG&k=0&no_gap=0&offset=0&limit=50
3.784 | 0.124 | search_minus_done; http://172.18.8.135:50400/match?q=CTTGCTCTTTGGCTTACGAGC&k=0&no_gap=0&offset=0&limit=0
3.784 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).