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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-12 11:57:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 1587 from Patent WO2008034648.
FB782314.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 7510 from Patent WO2008034648.
FB788237.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 28564 from Patent WO2008034648.
FB809291.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 35682 from Patent WO2008034648.
FB816409.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 39467 from Patent WO2008034648.
FB820194.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 43257 from Patent WO2008034648.
FB823984.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 46432 from Patent WO2008034648.
FB827159.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 64992 from Patent WO2008034648.
FB845719.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 76148 from Patent WO2008034648.
FB856875.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 84738 from Patent WO2008034648.
FB865465.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 93615 from Patent WO2008034648.
FB874342.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 103535 from Patent WO2008034648.
FB884262.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 109558 from Patent WO2008034648.
FB890285.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 111601 from Patent WO2008034648.
FB892328.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 114916 from Patent WO2008034648.
FB895643.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 117160 from Patent WO2008034648.
FB897887.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 1587 from Patent EP2090662.
HB652373.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 7510 from Patent EP2090662.
HB658296.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 28564 from Patent EP2090662.
HB679350.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 35682 from Patent EP2090662.
HB686468.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 39467 from Patent EP2090662.
HB690253.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 43257 from Patent EP2090662.
HB694043.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 46432 from Patent EP2090662.
HB697218.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 64992 from Patent EP2090662.
HB715778.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 76148 from Patent EP2090662.
HB726934.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 84738 from Patent EP2090662.
HB735524.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 93615 from Patent EP2090662.
HB744401.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 103535 from Patent EP2090662.
HB754321.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 109558 from Patent EP2090662.
HB760344.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 111601 from Patent EP2090662.
HB762387.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 114916 from Patent EP2090662.
HB765702.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 117160 from Patent EP2090662.
HB767946.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Sequence 152783 from Patent EP2090662.
HB803569.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Brassica rapa subsp. pekinensis mRNA, clone: BRest02-L02, 5'-end sequence.
DC844488.1:93-112
CTCAAATTCTCCGTCTACTTCTCCCTCGTC93GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Brassica oleracea var. viridis mRNA, clone: KALE-009N20, 5' end sequence.
DK459323.1:195-214
CTCAAATTCTCCGTCTACTTCTCCCTCGTC195GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Brassica oleracea var. viridis mRNA, clone: KALE-042H10, 5' end sequence.
DK471770.1:238-257
CTCAAATTCTCCGTCTACTTCTCCCTCGTC238GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Brassica oleracea var. viridis mRNA, clone: KALE-091A12, 5' end sequence.
DK490361.1:135-154
CTCAAATTCTCCGTCTACTTCTCCCTCGTC135GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Brassica oleracea var. viridis mRNA, clone: KALE-116J20, 5' end sequence.
DK500141.1:195-214
CTCAAATTCTCCGTCTACTTCTCCCTCGTC195GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
48RDOAM_UP_037_G04_14SEP2004_020 O. Alba 48RDOAM Brassica oleracea cDNA 5', mRNA sequence.
DY019023.1:192-211
CTCAAATTCTCCGTCTACTTCTCCCTCGTC192GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
0168349 Brassica napus Late bud Brassica napus cDNA, mRNA sequence.
EV165431.1:171-190
GCGTTTGATTTGATTTCTTTCTCCCTCGTC171GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
0202751 Brassica napus Undamaged cotyledons Brassica napus cDNA, mRNA sequence.
EV188543.1:232-251
CTCAAATTCTCCGTCTACTTCTCCCTCGTC232GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
0092612 Brassica napus Cold acclimation - dark Brassica napus cDNA, mRNA sequence.
EV195126.1:246-265
CTCAAATTCTCCGTCTACTTCTCCCTCGTC246GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
c11_12na_2q.s 12na Brassica napus cDNA clone c11_12na_2q 5, mRNA sequence.
GT081336.1:165-184
CTCACATTCTCCGTCTACTTCTCCCTCGTC165GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
g02_12na_1a.s 12na Brassica napus cDNA clone g02_12na_1a 5, mRNA sequence.
GT082003.1:2-21
C2GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
b08_14na_1a.s 14na Brassica napus cDNA clone b08_14na_1a 5, mRNA sequence.
GT082999.1:187-206
CTCAAATTCTCCGTCTACTTCTCCCTCGTC187GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
BOHZO96TF BO_2_3_KB Brassica oleracea genomic clone BOHZO96, genomic survey sequence.
BH661960.1:253-272
CTCAAATTCTCCGTCTACTTCTCCCTCGTC253GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB037A09, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
AC189328.2:83816-83835
CTCAAATTCTCCGTCTACTTCTCCCTCGTC83816GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Brassica napus mutant Cr3529 unknown protein Cr17 mRNA, complete cds.
AY952464.1:166-185
CTCAAATTCTCCGTCTACTTCTCCCTCGTC166GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Brassica napus genome assembly, chromosome: C09.
HG994373.1:457105-457124
CTCAAATTCTCCGTCTACTTCTCCCTCGTC457105GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Brassica rapa subsp. nipposinica TBL26 gene, exon 1, 2, 3, cultivar: Kyo-nishiki.
LC142722.1:142-161
CTCAAATTCTCCGTCTACTTCTCCCTCGTC142GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Brassica rapa subsp. nipposinica TBL26 gene, exon 1, 2, 3, cultivar: Kyo-mizore.
LC142723.1:142-161
CTCAAATTCTCCGTCTACTTCTCCCTCGTC142GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Brassica rapa subsp. nipposinica TBL26 mRNA for trichome birefringence-like 26, partial cds, cultivar: Kyo-nishiki.
LC142724.1:125-144
CTCAAATTCTCCGTCTACTTCTCCCTCGTC125GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Brassica rapa subsp. nipposinica TBL26 mRNA for trichome birefringence-like 26, partial cds, cultivar: Kyo-mizore.
LC142725.1:125-144
CTCAAATTCTCCGTCTACTTCTCCCTCGTC125GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Brassica rapa genome, scaffold: A09.
LR031568.1:474458-474477
CTCAAATTCTCCGTCTACTTCTCCCTCGTC474458GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Brassica oleracea HDEM genome, scaffold: C9.
LR031875.1:485527-485546
CTCAAATTCTCCGTCTACTTCTCCCTCGTC485527GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:580357-580376
CTCAAATTCTCCGTCTACTTCTCCCTCGTC580357GCTCTCGCTTACTACTTCATCATCTCCAGCTTCACCGTCCCTCCTCCAAT
Thlaspi arvense genome assembly, chromosome: 5.
OU466861.1:48385026-48385045
TTTTGACAGCAATACTCCAATATCAAAGAG48385026GCTCTCGCTTACTACTTCATTTTAAAAAACTAAAATTAATAGAATTTTAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTCTCGCTTACTACTTCAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTCTCGCTTACTACTTCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.758 | 1.749 | search_plus_done; http://172.18.8.135:50400/match?q=GCTCTCGCTTACTACTTCAT&k=0&no_gap=0&offset=0&limit=50
1.899 | 0.141 | search_minus_done; http://172.18.8.135:50400/match?q=ATGAAGTAGTAAGCGAGAGC&k=0&no_gap=0&offset=0&limit=0
1.899 | 0.000 | cgi_end;

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