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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-11 23:17:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TFR5_18_D12_E001.g1 USDA-Tifton Peanut Library TFR5 Arachis hypogaea cDNA clone TFR5-018-92_D12 5', mRNA sequence.
ES720463.1:396-415
ACTCCAAAGGAAGTTGGAATTTTTCTTACT396GCTCTCGGATACCCATCAAAGACACCGATATATATTGCATCTGGAGGGAT
Arachis hypogaea DNA, clone: AHGS43O04.
DH961650.1:211-230
ACTCCAAAGGAAGTTGGAATTTTTCTTACT211GCTCTCGGATACCCATCAAAGACACCGATATATATTGCATCTGGAGGGAT
Arachis hypogaea cultivar Shitouqi chromosome B07.
CP030999.1:49800414-49800433
ACTCCAAAGGAAGTTGGAATTTTTCTTACT49800414GCTCTCGGATACCCATCAAAGACACCGATATATATTGCATCTGGAGGGAT
Arachis ipaensis cultivar K30076 chromosome 07.
CP049898.1:51151954-51151973
ACTCCAAAGGAAGTTGGAATTTTTCTTACT51151954GCTCTCGGATACCCATCAAAGACACCGATATATATTGCATCTGGAGGGAT
TSA: Arachis duranensis DurSNP_c37370.Ardu mRNA sequence.
HP037337.1:133-152
ATCCCTCCAGATGCAATATATATCGGTGTC133TTTGATGGGTATCCGAGAGCAGTAAGAAAAATTCCAACTTCCTTTGGAGT
TSA: Arachis hypogaea Ahy.Unigene13656 mRNA sequence.
JR553907.1:710-729
ATCCCTCCAGATGCAATATATATCGGTGTC710TTTGATGGGTATCCGAGAGCAGTAAGAAAAATTCCAACTTCCTTTGGAGT
Arachis hypogaea cultivar Shitouqi chromosome A07.
CP030989.1:62523464-62523483
ATCCCTCCAGATGCAATATATATCGGTGTC62523464TTTGATGGGTATCCGAGAGCAGTAAGAAAAATTCCAACTTCCTTTGGAGT
Suillia variegata genome assembly, chromosome: 3.
OX421844.1:39194732-39194751
TAAACAAAAAGAAAAAAAATTAAACATACT39194732TTTGATGGGTATCCGAGAGCACATCGGCCTCGTAACGAAAGAGATCCTTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTCTCGGATACCCATCAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTCTCGGATACCCATCAAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.270 | 0.261 | search_plus_done; http://172.18.8.135:50400/match?q=GCTCTCGGATACCCATCAAA&k=0&no_gap=0&offset=0&limit=50
0.362 | 0.092 | search_minus_done; http://172.18.8.135:50400/match?q=TTTGATGGGTATCCGAGAGC&k=0&no_gap=0&offset=0&limit=46
0.365 | 0.003 | cgi_end;

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