GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 01:31:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens mRNA, clone: WCC24l17_078, unspecified EST.
FY462635.1:98-120
GGAGAGCAAAAGAATGAAACCGTGAAGAAA98GCTGACGAAGGAACAAAGAAAGACGACAGTCCTGTTCCTGTCGTTTACAAACT
Trifolium repens isolate ACLI19 chromosome 01_Occ.
CP125836.1:20805408-20805430
CAACAGCAAAAGAATGAAACTGTGAAGAAA20805408GCTGACGAAGGAACAAAGAAAGATGATAGTCCTGTTCCTGTCGTTTACAAACT
Trifolium subterraneum genome assembly, chromosome: 3.
OX637463.1:34801135-34801157
AGTTTGTAAACAACAGGAACAGGACTGTCG34801135TCTTTCTTTGTTCCTTCGTCAGCTTTCTTAACGGTTTCATTCTTTTGCTGTTG
Trifolium fragiferum genome assembly, chromosome: 8.
OX940796.1:23703839-23703861
AGTTTGTAAACGACAGGAACAGGACTGTCG23703839TCTTTCTTTGTTCCTTCGTCAGCTTTCTTCACGGTTTCATTCTTTTGCTGTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCTGACGAAGGAACAAAGAAAGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTGACGAAGGAACAAAGAAAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.177 | 0.169 | search_plus_done; http://172.18.8.135:50400/match?q=GCTGACGAAGGAACAAAGAAAGA&k=0&no_gap=0&offset=0&limit=50
0.194 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=TCTTTCTTTGTTCCTTCGTCAGC&k=0&no_gap=0&offset=0&limit=48
0.195 | 0.001 | cgi_end;

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