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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-04 12:20:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Sciurus carolinensis genome assembly, chromosome: 9.
LR738598.1:68136690-68136709
GTGGCATGCACCTGTTGTGCCAATCGAGAG68136690GCTGATTTGCGGGAGAGAACACCTGAGCCCCAAATGCAAGACTAGCCTGG
TSA: Pyrus x bretschneideri Unigene58093_XinShao mRNA sequence.
JR646891.1:119-138
AGGAGTCGGGGGTTCCAGAGTGACTCAATG119GTTCTCTCCCGCAAATCAGCTCCAGAAGAACAACTCCAAAGCTATAAACG
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:27298508-27298527
AGGAGTCTGGAGTTCCAGAGTGACTCAATG27298508GTTCTCTCCCGCAAATCAGCTCCAGAAGAACAACTCCAAAGCTATAGACA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:26842750-26842769
AGGAGTCTGGAGTTCCAGAGTGACTCAATG26842750GTTCTCTCCCGCAAATCAGCTCCAGAAGAACAACTCCAAAGCTATAGACA
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:25852867-25852886
AGGAGTCTGGAGTTCCAGAGTGACTCAATG25852867GTTCTCTCCCGCAAATCAGCTCCAGAAGAACAACTCCAAAGCTATAGACA
Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:26703414-26703433
AGGAGTCTGGAGTTCCAGAGTGACTCAATG26703414GTTCTCTCCCGCAAATCAGCTCCAGAAGAACAACTCCAAAGCTATAAACG
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:18704170-18704189
AGGAGTCGGGGGTTCCAGAGTGACTCAATG18704170GTTCTCTCCCGCAAATCAGCTCCAGAAGAACAACTCCAAAGCTATAAACG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTGATTTGCGGGAGAGAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTGATTTGCGGGAGAGAAC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.158 | 0.149 | search_plus_done; http://172.18.8.135:50400/match?q=GCTGATTTGCGGGAGAGAAC&k=0&no_gap=0&offset=0&limit=50
0.245 | 0.087 | search_minus_done; http://172.18.8.135:50400/match?q=GTTCTCTCCCGCAAATCAGC&k=0&no_gap=0&offset=0&limit=49
0.249 | 0.004 | cgi_end;

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