GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-28 07:36:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
AP015043.1:4220876-4220895
GCCCCAGTTCTGGGCCAGGGCTTGTTGGGT4220876GCTGCCATGCACTGCTACTACAGCTGTGGAAGTGGCGAGGAATGTGGAGA
Vigna angularis mRNA, clone: VES06I10.
HX944541.1:201-220
TCTCCACATTCCTCGCCACTTCCACAGCTG201TAGTAGCAGTGCATGGCAGCACCCAACAAGCCCTGGCCCAGAACTGGGGC
Sambucus nigra genome assembly, chromosome: 12.
OX422218.1:242434744-242434763
TATGAAAATGAACATATACATGTATGCAAG242434744TAGTAGCAGTGCATGGCAGCATATATGGCAGTGTATGTAAGTTGCAACAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCTGCCATGCACTGCTACTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTGCCATGCACTGCTACTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=GCTGCCATGCACTGCTACTA&k=0&no_gap=0&offset=0&limit=50
0.189 | 0.094 | search_minus_done; http://172.18.8.135:50400/match?q=TAGTAGCAGTGCATGGCAGC&k=0&no_gap=0&offset=0&limit=49
0.190 | 0.001 | cgi_end;

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