GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:01:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Muscardinus avellanarius genome assembly, chromosome: 9.
OY726566.1:28835115-28835134
AGAATTTGCATTTCTGACAGATTTTCTGGT28835115GCTGCTGTTGCTACTGGATGGGGACCCTGCTTTGTAACTCCTGTCTTAGG
TSA: Aedes albopictus Aalb_oocyte_rep_c1375 mRNA sequence.
JO875838.1:501-520
CTGCATGGCACCGCTCTTCAGTTTTTTGTT501GCTGCTGTTGCTACTGGATGTGTGACTTTCAGGCTTGGCCATGTCGTCTG
Arachis hypogaea DNA, clone: AHGS43K17.
DH961614.1:116-135
GACAATAGTTCAGCAACGATGGAGACGGTG116GCTGCTGTTGCTACTGGATGAGAGAGAAGGGTTACTGGCAGAGAGAGAGA
Arachis hypogaea DNA, clone: SACT0703C11.
DH963898.1:204-223
GACAATAGTTCAGCAACGATGGAGACGGTG204GCTGCTGTTGCTACTGGATGAGAGAGAAGGGTTACTGGCAGAGAGAGAGA
Cenchrus purpureus cultivar elephant grass chromosome A6.
CP053459.1:9003966-9003985
ACGACAGGGTTCATATTCAGACTGACGTCG9003966GCTGCTGTTGCTACTGGATGGATGTACTGGGGAGCAAAGGGAGAGCTTGG
Cenchrus purpureus cultivar elephant grass chromosome A6.
CP053459.1:9298994-9299013
ACGACAGGGTTCATATTCAGACTGACGTCG9298994GCTGCTGTTGCTACTGGATGGATGTACTGGGGAGCAAAGGGAGAGCTTGG
Cenchrus americanus genome assembly, chromosome: PMC23DB6.
OX387244.1:12032283-12032302
GGAAAGCATATCATATTCAGTCTGACGTTG12032283GCTGCTGTTGCTACTGGATGGATGTACTGGGGAGCAAAGGGAAAGCTTGG
Cenchrus americanus genome assembly, chromosome: Pg6.
OZ001402.1:14758310-14758329
GGAAAGCATATCATATTCAGTCTGACGTTG14758310GCTGCTGTTGCTACTGGATGGATGTACTGGGGAGCAAAGGGAAAGCTTGG
Cenchrus americanus genome assembly, chromosome: Pg6.
OZ001410.1:14413184-14413203
GGAAAGCATATCATATTCAGTCTGACGTTG14413184GCTGCTGTTGCTACTGGATGGATGTACTGGGGAGCAAAGGGAAAGCTTGG
Clistopyga incitator genome assembly, chromosome: 1.
OX382171.1:5859174-5859193
AGCTAGTGAAAATCCTCGAGTTGAAAGCGA5859174GCTGCTGTTGCTACTGGATGAGCGATCCTATATACTATGCAGCTATATAG
Anania crocealis genome assembly, chromosome: 19.
OX438868.1:6249014-6249033
CTCGCGCTCGCTTGCGGTTGAGCTAGCACC6249014GCTGCTGTTGCTACTGGATGAACCTGGGATTAAAAGCAATATCTCAAAAA
Tromatobia lineatoria genome assembly, chromosome: 1.
OX453034.1:8611223-8611242
AGCTAGTGAAAATCCTCGAGTTGAAAGCGA8611223GCTGCTGTTGCTACTGGATGAGCAATCCTATATACTATATACATCTATAT
Epistrophe eligans genome assembly, chromosome: 2.
OX596029.1:53212200-53212219
TAAAATTTTTAATTACAGTCGGCTGTTGAT53212200GCTGCTGTTGCTACTGGATGGATGATGATGGTGATGGTTGTGTGCCATTG
Acomys russatus genome assembly, chromosome: 15.
LR877226.1:2632448-2632467
GCACACTAGGGAGTTCCCATGTAATAGCAG2632448CATCCAGTAGCAACAGCAGCCCTATTCTATGTTCTTGAATCTGGTAAGGT
Microcaecilia unicolor genome assembly, chromosome: 7.
LR594638.1:183019118-183019137
CTCTGCTGCGGCAGCTGGTTATGACGACAT183019118CATCCAGTAGCAACAGCAGCTGCTGGATGATCTCATCTCAGAGCACTAAG
Falco punctatus genome assembly, chromosome: Z.
OY723439.1:35127732-35127751
TAGCCTCCCTTGTTGCAGAGCACTGGCAGA35127732CATCCAGTAGCAACAGCAGCAATGTGAAAAGCACAAGAACACACTAGAAC
TSA: Aedes albopictus Aalb_oocyte_rep_c11841 mRNA sequence.
JO852857.1:599-618
CAGACGACATGGCCAAGCCTGAAAGTCACA599CATCCAGTAGCAACAGCAGCAACAAAAAACTAGAAGAGCGGTGCCATGCA
Arachis hypogaea cultivar Shitouqi chromosome A07.
CP030989.1:42350251-42350270
TCTCTCTCTCTGCCAGTAACCCTTCTCTCT42350251CATCCAGTAGCAACAGCAGCCACCGTCTCCATCGTTGCTGAACTATTGTC
Cenchrus purpureus cultivar elephant grass chromosome B6.
CP053466.1:202350955-202350974
TACTAAAGTCCCTTTGCTCCGCAGTACATC202350955CATCCAGTAGCAACAGCAGCCAACGTCAGTCTGAATATGAACCCTGTCGT
Anopheles darlingi genome assembly, chromosome: 3.
OX030912.1:64573993-64574012
ACAAGCGCGCTACCAGCTGATGACAGCCAG64573993CATCCAGTAGCAACAGCAGCAGCAGCAGCTCGACTGCAGCTCGTTCGTCG
Carabus problematicus genome assembly, chromosome: 6.
OY728583.1:15272481-15272500
CACACGGACTTGTGTGTGCTTGTCGGTGCA15272481CATCCAGTAGCAACAGCAGCCTGGCAGGATAACGGTGTGAAGAGTCCGCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTGCTGTTGCTACTGGATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTGCTGTTGCTACTGGATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.246 | 0.237 | search_plus_done; http://172.18.8.135:50400/match?q=GCTGCTGTTGCTACTGGATG&k=0&no_gap=0&offset=0&limit=50
0.379 | 0.133 | search_minus_done; http://172.18.8.135:50400/match?q=CATCCAGTAGCAACAGCAGC&k=0&no_gap=0&offset=0&limit=37
0.385 | 0.005 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).