GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 19:05:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dianthus caryophyllus mRNA, clone: CES05K16, 5' end sequence.
FY384237.1:153-172
GCTGCCGTGCTCACCAATTCGGACCCAAGT153GCTGGAAGTTGCTCGTTTTCTGCAAGCTCGGGGACCTCTGGTTCTCCGAG
Dianthus caryophyllus mRNA, clone: CFES02A07, 5' end sequence.
FY394553.1:346-365
GCTGCCGTGCTCACCAATTCGGACCCAAGT346GCTGGAAGTTGCTCGTTTTCTGCAAGCTCGGGGACCTCTGGTTCTCCGAG
Dianthus caryophyllus mRNA, clone: CFES02A19, 5' end sequence.
FY394565.1:346-365
GCTGCCGTGCTCACCAATTCGGACCCAAGT346GCTGGAAGTTGCTCGTTTTCTGCAAGCTCGGGGACCTCTGGTTCTCCGAG
Dianthus caryophyllus mRNA, clone: CFES03P09, 5' end sequence.
FY395292.1:454-473
GCTGCCGTGCTCACCAATTCGGACCCAAGT454GCTGGAAGTTGCTCGTTTTCTGCAAGCTCGGGGACCTCTGGTTCTCCGAG
Dianthus caryophyllus mRNA, clone: CFES06N08, 5' end sequence.
FY396378.1:195-214
GCTGCCGTGCTCACCAATTCGGACCCAAGT195GCTGGAAGTTGCTCGTTTTCTGCAAGCTCGGGGACCTCTGGTTCTCCGAG
Dianthus caryophyllus mRNA, clone: CFES21P23, 5' end sequence.
FY402065.1:483-502
GCTGCCGTGCTCACCAATTCGGACCCAAGT483GCTGGAAGTTGCTCGTTTTCTGCAAGCTCGGGGACCTCTGGTTCTCCGAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCTGGAAGTTGCTCGTTTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTGGAAGTTGCTCGTTTTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.546 | 0.538 | search_plus_done; http://172.18.8.135:50400/match?q=GCTGGAAGTTGCTCGTTTTC&k=0&no_gap=0&offset=0&limit=50
0.578 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=GAAAACGAGCAACTTCCAGC&k=0&no_gap=0&offset=0&limit=44
0.578 | 0.000 | cgi_end;

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