GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:43:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Denticeps clupeoides genome assembly, chromosome: 1.
LR535813.1:18077701-18077720
CTGCAGCAAACACCGGGAAGATGGCCAGTA18077701GCTGGCATGAATGAAGAGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTACC
Danio aesculapii genome assembly, chromosome: 20.
LR812504.1:40597997-40598016
CAAGGGATGTTCTTATGATTAGTGAATGAA40597997GCTGGCATGAATGAAGAGTGTTTGCTAATCAAACTCAAACCATCTACTGA
Anas platyrhynchos genome assembly, chromosome: 1.
LS423611.1:170621423-170621442
CCTCCAGATTTGCAGATTTCATTATAAAAT170621423GCTGGCATGAATGAAGAGTGACTTGAATTTCTGTTTGCAGGGCCTATCAT
Lotus japonicus genomic DNA, chromosome 5, clone: LjB06H02, BM1787.
AP010430.1:38654-38673
GCTAATATATATGACTTTAGGAATATATAT38654GCTGGCATGAATGAAGAGTGAGTGCGTGTGTGTGTGTATATATATATATA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:10013338-10013357
GCTAATATATATGACTTTAGGAATATATAT10013338GCTGGCATGAATGAAGAGTGAGTGCGTGTGTGTGTGTATATATATATATA
Felis catus Senzu DNA, chromosome: F1, American Shorthair breed.
AP023168.1:63802266-63802285
GCAGCTGTGTGCTTCGTCTCCCCCCAGACC63802266CACTCTTCATTCATGCCAGCTGGCCTGGCCTTGGGAAGCCTCTGCGTGGT
Gossypium rotundifolium isolate GPK201 chromosome 12.
CP106733.1:12754074-12754093
GCTGAAATTGATAGTCCAAAATTGAACCAA12754074CACTCTTCATTCATGCCAGCATCATTGAAAAAATTAAAAAAAAAACCAAA
Acleris literana genome assembly, chromosome: 16.
OX335684.1:810884-810903
ATTGATGGTATCCCATCACTATTTAATTCC810884CACTCTTCATTCATGCCAGCTTTTATTTTACTACGCGCTTATTTAAATCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCTGGCATGAATGAAGAGTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTGGCATGAATGAAGAGTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.111 | 0.103 | search_plus_done; http://172.18.8.135:50400/match?q=GCTGGCATGAATGAAGAGTG&k=0&no_gap=0&offset=0&limit=50
0.140 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=CACTCTTCATTCATGCCAGC&k=0&no_gap=0&offset=0&limit=45
0.142 | 0.002 | cgi_end;

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