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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:05:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH052O08, complete sequence.
AC155342.2:129285-129304
AATTTTTTATCCGTTACTATCCACTTTGAA129285GCTGGTTTGATAAAACTGCTGCAATTGAATGTTACCAATGAAACAAACAA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB022F09, complete sequence.
AC240998.1:9024-9043
AATTTTTTATCCGTTACTATCCACTTTGAA9024GCTGGTTTGATAAAACTGCTGCAATTGAATGTTACCAATGAAACAAACAA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB009G06, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces.
AC240986.1:40563-40582
TTGTTTGTTTCATTGGTAACATTCAATTGC40563AGCAGTTTTATCAAACCAGCTTCAAAGTGGATAGTAACGGATAAAAAATT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB070G10, *** SEQUENCING IN PROGRESS ***, 6 ordered pieces.
AC241060.1:62433-62452
TTGTTTGTTTCATTGGTAACATTCAATTGC62433AGCAGTTTTATCAAACCAGCTTCAAAGTGGATAGTAACGGATAAAAAATT
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:1691439-1691458
TTGTTTGTTTCATTGGTAACATTCAATTGC1691439AGCAGTTTTATCAAACCAGCTTCAAAGTGGATAGTAACGGATAAAAAATT
Brassica napus genome assembly, chromosome: A03.
HG994357.1:1741612-1741631
TTGTTTGTTTCATTGGTAACATTCAATTGC1741612AGCAGTTTTATCAAACCAGCTTCAAAGTGGATAGTAACGGATAAAAAATT
Pantoea alhagi strain LTYR-11Z chromosome, complete sequence.
CP019706.1:3116415-3116434
TTATATTGCACATTGCTGGGATAACGGAAG3116415AGCAGTTTTATCAAACCAGCCCAGAACTTAAATATTACCAAGCTAAAATA
Hemistola chrysoprasaria genome assembly, chromosome: 8.
OX346717.1:10304332-10304351
CACAAGAATTAACCATTCCTGACAACTGCA10304332AGCAGTTTTATCAAACCAGCCTCATCTTGAAGAGCTTTCATTATTCGTTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTGGTTTGATAAAACTGCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTGGTTTGATAAAACTGCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.161 | 0.152 | search_plus_done; http://172.18.8.135:50400/match?q=GCTGGTTTGATAAAACTGCT&k=0&no_gap=0&offset=0&limit=50
0.254 | 0.093 | search_minus_done; http://172.18.8.135:50400/match?q=AGCAGTTTTATCAAACCAGC&k=0&no_gap=0&offset=0&limit=48
0.259 | 0.004 | cgi_end;

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