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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 03:16:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Silurus aristotelis genome assembly, chromosome: 6.
OX327758.1:23994046-23994065
GGTTATGATGTAGGTGAGGATTCCTGGGGT23994046GCTGTCAGCTTTCCAATTCATCCCAAAGGTGTTTAGTAGGGATGAGATCT
Silurus aristotelis genome assembly, chromosome: 28.
OX327780.1:6718646-6718665
AAAGTTAAGTACTAATGTAAAGTGAAGGGT6718646GCTGTCAGCTTTCCAATTCATCCCAGAGGAGTTCCATAGGGTTGAGGTCA
Mdfw2011f02.y1 Mdfw Malus domestica cDNA clone Mdfw2011f02 5' similar to TR:Q9SS03 Q9SS03 F12P19.3, mRNA sequence.
CN492796.1:16-35
CGAAACCATGGCTAG16GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
Mdfw2037b02.y1 Mdfw Malus domestica cDNA clone Mdfw2037b02 5' similar to TR:Q9SS03 Q9SS03 F12P19.3, mRNA sequence.
CN580207.1:16-35
CGAAACCATGGCTAG16GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
Mdfw2031p18.y1 Mdfw Malus domestica cDNA clone Mdfw2031p18 5' similar to TR:Q9SS03 Q9SS03 F12P19.3, mRNA sequence.
CN581236.1:17-36
CCGAAACCATGGCTAG17GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
Mdfw2043h11.y1 Mdfw Malus domestica cDNA clone Mdfw2043h11 5' similar to TR:Q9SS03 Q9SS03 F12P19.3, mRNA sequence.
CN997194.1:10-29
CATGGCTAG10GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
Mdfrt3053b13.y1 Mdfrt Malus domestica cDNA clone Mdfrt3053b13 5' similar to TR:Q9SS03 Q9SS03 F12P19.3, mRNA sequence.
CO752228.1:32-51
TGGAAGACATACCACCGAAACCATGGCTAG32GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
Mdfrt3057b04.y1 Mdfrt Malus domestica cDNA clone Mdfrt3057b04 5' similar to TR:Q9SS03 Q9SS03 F12P19.3, mRNA sequence.
CO902372.1:32-51
TGGAAGACATACCACCGAAACCATGGCTAG32GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
020904AARA012885HT (AARA) Royal Gala partially senescing leaf Malus domestica cDNA clone AARA012885, mRNA sequence.
EB123739.1:17-36
CCGAAACCATGGCTAG17GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
030123ABLC005044HT (ABLC) Braeburn cell culture three days after subculture Malus domestica cDNA clone ABLC005044, mRNA sequence.
EB156384.1:16-35
CGAAACCATGGCTAG16GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:766531-766550
TCGAAGACATACCACCGAAACCATGGCTAG766531GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:769565-769584
TTGAAGACATACCACCGAAACCATGGCTAG769565GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:836757-836776
TTGAAGACATACCACCGAAACCATGGCTAG836757GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:776050-776069
TTGAAGACATACCACCGAAACCATGGCTAG776050GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:806920-806939
TTGAAGACATACCACCAAAACCATGGCTAG806920GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:877633-877652
TTGAAGACATACCACCGAAACCATGGCTAG877633GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
Malus domestica genome assembly, chromosome: 11.
OU696687.1:867246-867265
TTGAAGACATACCACCGAAACCATGGCTAG867246GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
Malus domestica genome assembly, chromosome: 11.
OU744552.1:848087-848106
TTGAAGACATACCACCGAAACCATGGCTAG848087GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
Malus domestica genome assembly, chromosome: 11.
OU744963.1:877674-877693
TTGAAGACATACCACCGAAACCATGGCTAG877674GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
Malus domestica genome assembly, chromosome: 11.
OU745001.1:843553-843572
TTGAAGACATACCACCGAAACCATGGCTAG843553GCTGTCAGCTTTCCAATTCACAATTTTCTCCCTCCTCTCTTCCTTTGCCT
Silurus aristotelis genome assembly, chromosome: 10.
OX327762.1:24671982-24672001
TGACCTCAACCCTATTGAACATCTTTGGGA24671982TGAATTGGAAAGCTGACAGCACCTCAGGCCTCCTCACATCATCCTACATC
Silurus aristotelis genome assembly, chromosome: 18.
OX327770.1:2284001-2284020
TGATCTCATCCCTACTGAACACCTTTGGGA2284001TGAATTGGAAAGCTGACAGCACCCCAGGTCTCCTCACCTACTTCAGTACC
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:40454967-40454986
AGGCAAAAGAAGAGAGGAGGGAGAAAATTG40454967TGAATTGGAAAGCTGACAGCCTAGCCATGGTTTCGGTGGTATGTCTTCAA
Parapoynx stratiotata genome assembly, chromosome: 14.
OU342471.1:7156879-7156898
TTAGCTGTAGTATTATATTACTCTGTAGTT7156879TGAATTGGAAAGCTGACAGCAAATATTCAAGAGCTGGATCATGTTTGACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTGTCAGCTTTCCAATTCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTGTCAGCTTTCCAATTCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.441 | 0.432 | search_plus_done; http://172.18.8.135:50400/match?q=GCTGTCAGCTTTCCAATTCA&k=0&no_gap=0&offset=0&limit=50
0.589 | 0.149 | search_minus_done; http://172.18.8.135:50400/match?q=TGAATTGGAAAGCTGACAGC&k=0&no_gap=0&offset=0&limit=30
0.592 | 0.003 | cgi_end;

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