GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 06:08:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Larimichthys crocea genome assembly, chromosome: XXIV.
LT972191.1:9490092-9490111
CGAGTTACACTCAGGTATAGAAAGGTCAGA9490092GCTGTGGCAGAATCCTTTTCTTACATTACTGTGCAACGCGATAATCTCTT
Acipenser ruthenus genome assembly, chromosome: 7.
OV737688.1:36818112-36818131
TTTCCCTGGTCATTGTTCTTCAGTGGATCT36818112GCTGTGGCAGAATCCTTTTCAATAACCAGCTGCTTTACTGTGGATTTAGG
Acipenser ruthenus genome assembly, chromosome: 7.
OV754676.1:39670843-39670862
TTTCCCTGGTCATTGTTCTTCAGTGGATCT39670843GCTGTGGCAGAATCCTTTTCAATAACCAGCTGCTTTACTGTGGATTTAGG
TSA: Pyrus x bretschneideri Unigene29790_XinShao mRNA sequence.
JR622900.1:103-122
CCAGTAGATTTCCCCAATATTTTCTCAAAT103GCTGTGGCAGAATCCTTTTCATAGGCATCCATAAGCTGTTTTTTCTCTGT
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:38505090-38505109
CCAGTAGATTTCCCCAATATTTTCTCAAAT38505090GCTGTGGCAGAATCCTTTTCATAGGCATCCATAAGCTGTTTTTTCTCTGC
Pyrus communis genome assembly, chromosome: 8.
OY757075.1:25566934-25566953
CCGGTAGATTTCCCCAATACTTTCTCAAAT25566934GCTGTGGCAGAATCCTTTTCATAGGCATCCATAAGCTGTTTTTTCTCTGT
FES002H21_2301 Ficus elastica stem cDNA library (FES) Ficus elastica cDNA clone FES002H21, mRNA sequence.
GW829106.1:330-349
GTTGGAGCAGAAGCTGTAGCTGCAGTTGGT330GAAAAGGATTCTGCCACAGCTTCTGATATGGTTGACATCTGGGATTACAA
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:2550365-2550384
ACAGAGAAAAAACAGCTTATGGATGCCTAT2550365GAAAAGGATTCTGCCACAGCATTTGAGAAAATATTGGGGAAATCTACTGG
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2625053-2625072
ACAGAGAAAAAACAGCTTATGGATGCCTAT2625053GAAAAGGATTCTGCCACAGCATTTGAGAAAATATTGGGGAAATCTACTGG
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2704755-2704774
ACAGAGAAAAAACAGCTTATGGATGCCTAT2704755GAAAAGGATTCTGCCACAGCATTTGAGAAAATATTGGGGAAATCTACTGG
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:2695327-2695346
ACAGAGAAAAAACAGCTTATGGATGCCTAT2695327GAAAAGGATTCTGCCACAGCATTTGAGAAAATATTGGGGAAATCTACTGG
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2611631-2611650
ACAGAGAAAAAACAGCTTATGGATGCCTAT2611631GAAAAGGATTCTGCCACAGCATTTGAGAAAATATTGGGGAAATCTACTGG
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:2624931-2624950
ACAGAGAAAAAACAGCTTATGGATGACTAT2624931GAAAAGGATTCTGCCACAGCATTTGAGAAAATATTGGGGAAATCTACCGG
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2719329-2719348
ACAGAGAAAAAACAGCTTATGGATGCCTAT2719329GAAAAGGATTCTGCCACAGCATTTGAGAAAATATTGGGGAAATCTACTGG
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2707588-2707607
ACAGAGAAAAAACAGCTTATGGATGCCTAT2707588GAAAAGGATTCTGCCACAGCATTTGAGAAAATATTGGGGAAATCTACTGG
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2784600-2784619
ACAGAGAAAAAACAGCTTATGGATGCCTAT2784600GAAAAGGATTCTGCCACAGCATTTGAGAAAATATTGGGGAAATCTACTGG
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2824552-2824571
ACAGAGAAAAAACAGCTTATGGATGCCTAT2824552GAAAAGGATTCTGCCACAGCATTTGAGAAAATATTGGGGAAATCTACTGG
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2768813-2768832
ACAGAGAAAAAACAGCTTATGGATGCCTAT2768813GAAAAGGATTCTGCCACAGCATTTGAGAAAATATTGGGGAAATCTACTGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCTGTGGCAGAATCCTTTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTGTGGCAGAATCCTTTTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.128 | 0.119 | search_plus_done; http://172.18.8.135:50400/match?q=GCTGTGGCAGAATCCTTTTC&k=0&no_gap=0&offset=0&limit=50
0.230 | 0.102 | search_minus_done; http://172.18.8.135:50400/match?q=GAAAAGGATTCTGCCACAGC&k=0&no_gap=0&offset=0&limit=44
0.238 | 0.008 | cgi_end;

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