GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:31:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Nannobrachium achirus genome assembly, chromosome: 3.
OY997640.1:55310544-55310563
GCTATAGAGAGAGAGATCTCTCTCTATAGC55310544GCTGTTGCTACTCGCAATGAGGGCCTCTCCAACTCTTTTTCCCGGGCTGG
KS13043E10 KS13 Capsicum annuum cDNA, mRNA sequence.
GD055538.1:96-115
TGGTGGCAATATGAGTACTCGCAATATATT96GCTGTTGCTACTCGCAATGATGTTGCTGATATATATATATATATATATAT
Capsicum annuum Takanotsume DNA, chromosome 12, sequence.
AP026707.1:261692026-261692045
CCCACTACATTAGAATATACCAAATATATT261692026GCTGTTGCTACTCGCAATGATGTTGCTGATATATATATATATATATATAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 12.
CP124720.1:1218119-1218138
TGGTGGCAATATGAGTACTCGCAATATATT1218119GCTGTTGCTACTCGCAATGATGTTGCTGATATATATATATATATATATGC
Nannobrachium achirus genome assembly, chromosome: 5.
OY997642.1:54241414-54241433
TCAGCCCGGGAAAAAGAGTTGGAGAGGCCC54241414TCATTGCGAGTAGCAACAGCGCTATAGAGAGAGATCTCTCTCTATAGCAC
KS13036H10 KS13 Capsicum annuum cDNA, mRNA sequence.
GD054950.1:258-277
ATATATATATATATATATATATCAGCAACA258TCATTGCGAGTAGCAACAGCAATATATTGCGAGTACTCATATTGCCACCA
TSA: Capsicum annuum MGMT_Contig38924 mRNA sequence.
JW089168.1:326-345
ATATATATATATATATATATATCAGCAACA326TCATTGCGAGTAGCAACAGCAATATATTGCGAGTACTCATATTGCCACCA
Capsicum annuum Takanotsume DNA, chromosome 12, sequence.
AP026707.1:261584251-261584270
ATATATATATATATATATATATCAGCAACA261584251TCATTGCGAGTAGCAACAGCAATATATTGCGAGTACTCATATTGCCACCA
Calothrix sp. PCC 6303, complete genome.
CP003610.1:296977-296996
TGTTGAAGCTGCTCCATTATATCGATTAGT296977TCATTGCGAGTAGCAACAGCTTGTTCAGAGTAAGGATTGTAAGTAATGGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCTGTTGCTACTCGCAATGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTGTTGCTACTCGCAATGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.199 | 0.190 | search_plus_done; http://172.18.8.135:50400/match?q=GCTGTTGCTACTCGCAATGA&k=0&no_gap=0&offset=0&limit=50
0.336 | 0.138 | search_minus_done; http://172.18.8.135:50400/match?q=TCATTGCGAGTAGCAACAGC&k=0&no_gap=0&offset=0&limit=46
0.340 | 0.004 | cgi_end;

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