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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-15 21:27:31, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Apodemus sylvaticus genome assembly, chromosome: 4.
OX359300.1:114811154-114811171
TGGCCTTGTCTGTGGGACATTTCCTTGATT114811154GCTGTTTGATGGGAGTTCCAGTGTACCGTGAGCGCTCCCATCCCTGGT
Lagenorhynchus acutus genome assembly, chromosome: 7.
OZ185463.1:101148835-101148852
AATGGGAAGAACAGGGACTTTGGATACTAA101148835GCTGTTTGATGGGAGTTCTGGCTCAGCCACTTAGCTGTATGATCCTGA
Cucumis melo isolate PI 511890 chromosome 8.
CP136107.1:4325942-4325959
GAAGCGTGTCGTCAGGGCGGAGGAGCTTGA4325942GCTGTTTGATGGGAGTTCCATTTTCGGACTTCAAAGTAGAGGAAGTGA
Cannabis sativa cultivar ERBxHO40_23 chromosome 8.
CP158659.1:39764547-39764564
GATTGGCCTTTGGGTTACTCGTTCTTGAAT39764547GCTGTTTGATGGGAGTTCACCTTGTTGACCGGCCAGAGGTTCTCCACT
Cucumis melo genomic scaffold, anchoredscaffold00007.
LN681875.1:4325004-4325021
GAAGCGTGTCGTCAGGGCGGAGGAGCTTGA4325004GCTGTTTGATGGGAGTTCCATTTTCGGACTTCAAAGTAGAGGAAGTGA
Cucumis melo genomic chromosome, chr_8.
LN713262.1:4325004-4325021
GAAGCGTGTCGTCAGGGCGGAGGAGCTTGA4325004GCTGTTTGATGGGAGTTCCATTTTCGGACTTCAAAGTAGAGGAAGTGA
Chionographis japonica genome assembly, chromosome: 3.
OX393551.1:78593778-78593795
CGGGACAATCTAGCCATAGGCGAAGCAGAG78593778GCTGTTTGATGGGAGTTCGCACGCATCGACCAGGTGACATTTACTACC
Chionographis japonica genome assembly, chromosome: 3.
OX393551.1:78602518-78602535
CGGGACAATCCAGCCATAGGCGGAGCGGAG78602518GCTGTTTGATGGGAGTTCGCACGCATCGACCAGATGACATTTACTTCC
Chionographis japonica genome assembly, chromosome: 3.
OX393551.1:78644834-78644851
CGGGACAATCCAGCCATAGGCGGAGCGGAG78644834GCTGTTTGATGGGAGTTCGCACGCATCGACCAGATGACATTTACTTCC
Salicornia ramosissima genome assembly, chromosome: 7.
OX596238.1:31012864-31012881
GATTTTTTCGTACCCCCCTATCATTGCACG31012864GCTGTTTGATGGGAGTTCACAGCTGCCATAACCATGGTAGAGGAGGAG
Tripolium pannonicum genome assembly, chromosome: 1.
OZ219250.1:397630391-397630408
GAATCAAAGATAATAACTAGGTTGTTTATA397630391GCTGTTTGATGGGAGTTCAAAACAACTTTTATGGTGGTGTTTGGGTGA
Leptopterna dolabrata genome assembly, chromosome: 9.
OX940983.1:949424-949441
GGGTGCTGCTTTCTAGCGAGAAGGTGAAAT949424GCTGTTTGATGGGAGTTCGAAGGACGAATGAGATCCAGGTGTTTTTTT
Thereva nobilitata genome assembly, chromosome: 1.
OY979694.1:74122504-74122521
TAGAATTGCTACCTGACTTAACAACGAAAA74122504GCTGTTTGATGGGAGTTCGACGTTTTATAGCTAGACGAGGCGCCCCGC
Cerceris ruficornis genome assembly, chromosome: 14.
OZ022530.1:1509785-1509802
GCCGCAAGTTCCCGAGTTAATTAATACTCG1509785GCTGTTTGATGGGAGTTCTAGCGAAAATACGACACGTGGTCTTGACTC
Apteryx australis mantelli genome assembly, scaffold: scaffold7.
LK064712.1:9533738-9533755
GAATAATCTAGAGCTGGTGATTAAGACACT9533738GCTGTTTGATGGGAGTTCTTAAAAGACAGGGCAACTCTTCTAACCACA
Thunnus maccoyii genome assembly, chromosome: 8.
OU343198.1:9786766-9786783
CAGGATCACATTTAATTTGCTGAATGTGTT9786766GCTGTTTGATGGGAGTTCATTTGTTTCTAAAAAGAATCTATTAGTGGA
Lipophrys pholis genome assembly, chromosome: 21.
OY726553.1:25018974-25018991
ATTGTTTGACCTGCAGTAATTAAGTTTGGG25018974GCTGTTTGATGGGAGTTCTTACGGAGTGGCAAATCAAATCAAATGGCT
Thunnus thynnus genome assembly, chromosome: 9.
OZ004740.1:9901175-9901192
CAGGATCACATTTAATTTGCTGAATGTGTT9901175GCTGTTTGATGGGAGTTCATTTGTTTCTAAAAAGAATCTATTAGCGGA
Triturus cristatus genome assembly, chromosome: 12.
OZ123763.1:685436617-685436634
CAGATTTAATCTTAGTTCTTGGATGTCATT685436617GCTGTTTGATGGGAGTTCCTTGATGGGAGTTCCTTGATGTTAATACCT
EST1102398 Dulce mature fruit library Cucumis melo cDNA clone FR14O1, mRNA sequence.
DV633802.1:555-572
TCACTTCCTCTACTTTGAAGTCCGAAAATG555GAACTCCCATCAAACAGCTCAAGCTCCTCCGCCCTGACGACACGCTTC
EST1102893 Tam Dew mature fruit library Cucumis melo cDNA clone FR16G19, mRNA sequence.
DV634297.1:304-321
ACACTTCCTCTACTTTGAAGTCCGAAAATG304GAACTCCCATCAAACAGCTCAAGCTCCTCCGCCCTGACGACACGCTTC
EST1103317 Tam Dew mature fruit library Cucumis melo cDNA clone FR17L23, mRNA sequence.
DV634721.1:566-583
TCACTTCCTCTACTTTGAAGTCCGAAAATG566GAACTCCCATCAAACAGCTCAAGCTCCTCCGCCCTGACGACACGCTTC
Ipomoea batatas mRNA, clone: IbTES04G13, unspecified EST, cultivar: Fusanoaki.
HX978037.1:931-948
GCAAGCAGACAGTTCGCCTCTCCTGGGGTC931GAACTCCCATCAAACAGCAGCATGGGAGAAAC
TSA: Cucumis sativus var. sativus cultivar Vlaspik CuSa200910_9133, mRNA sequence.
JW927298.1:618-635
TCACTTCCTCTACTATGAAGTCCGAAAATG618GAACTCCCATCAAACAGCTCAAGCTCCTCCGCCCTGACGACACGCTTC
A BAC library has been constructed from PN40024 genotype using the restriction enzyme HindIII (clone prefix : VV40024H).
CU802499.1:35-52
TAAAGTAGCATTAATCAGTCTTGGTTTTGT35GAACTCCCATCAAACAGCTTTTTGTTTGTGTTCAAGTCTACAAAAACA
Cannabis sativa cultivar ERBxHO40_23 chromosome 8.
CP158649.1:15840352-15840369
AGTGGAGAACCTCTGGCCGGTCAACAAGGT15840352GAACTCCCATCAAACAGCATTCAAGAACGAGTAACCCAAAGGCCAATC
Salicornia ramosissima genome assembly, chromosome: 4.
OX596235.1:43817236-43817253
CTCCTCCTCTACCATGGTTATGGCTGCTGT43817236GAACTCCCATCAAACAGCCGTGCAATGATAGGGGGGTACGAAAAAATC
Logfia minima genome assembly, chromosome: 6.
OY992768.1:27285815-27285832
ATTATCTATCTCTTTTTGCTTGATTGAGCT27285815GAACTCCCATCAAACAGCTCTTCAATACATGTTTCTATATCTTCTGGC
Macrobrachium nipponense isolate FS-2020 chromosome 30.
CP062009.1:6754127-6754144
CTCTTAATTGGCCCCGTGATTACAATCGGC6754127GAACTCCCATCAAACAGCATTGACTTGTGATCTGCACTTCTAATAGGG
Lasioglossum lativentre genome assembly, chromosome: 7.
OU744361.1:3006282-3006299
TTACACAGCATCGCATCAAGTTGAAGGAGG3006282GAACTCCCATCAAACAGCGCTATCGCCCTCGCAACCCGGCTATGCAAA
Triaenodes bicolor genome assembly, chromosome: 5.
OZ194529.1:30739480-30739497
TAAATAAATAAATAAGAAAGCCATCAACAA30739480GAACTCCCATCAAACAGCGCATGCGTTTATTCTAAAAGAAACCTCGGA
Bufo bufo genome assembly, chromosome: 4.
LR991670.1:362639088-362639105
GTTGATCAACTGCTGACGGTCTTGGTCCTG362639088GAACTCCCATCAAACAGCTGATTATGCTAGGTCTGAAAAACGGCTAGG
Streptopelia turtur genome assembly, chromosome: 29.
OU015479.1:18975666-18975683
TTTATTTCTCTTTTTGAGCCGCGAAGCGCA18975666GAACTCCCATCAAACAGCTCCACAACAGGCAGGGTTGCCTGAACCTAC
Nesoenas mayeri genome assembly, chromosome: 13.
OY720069.1:12092520-12092537
TTTATTTCTCTTTCTGAGCCGCGAAGCGCA12092520GAACTCCCATCAAACAGCTCCACAACAGGCAGGGTTGCCTGAACCTAC
Chelon labrosus genome assembly, chromosome: 2.
OY741290.1:18247734-18247751
CTTGAACAGTGGACAAGTGGCATTTTGTCT18247734GAACTCCCATCAAACAGCACGGAAACCATCAAAATGACTTTTGATGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTGTTTGATGGGAGTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTGTTTGATGGGAGTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.423 | 0.415 | search_plus_done; http://172.18.8.135:50800/match?q=GCTGTTTGATGGGAGTTC&k=0&no_gap=0&offset=0&limit=50
0.976 | 0.552 | search_minus_done; http://172.18.8.135:50800/match?q=GAACTCCCATCAAACAGC&k=0&no_gap=0&offset=0&limit=31
0.986 | 0.011 | cgi_end;

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