GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 17:01:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus clone JCVI-FLLj-14L3 unknown mRNA.
BT145201.1:416-438
AAACGCTAGATCCTGAAGTGAAAATTACTA416GCTTATCTATCATCTCTCCTGATAGAGGTGACATTGTTCTTCCTGTTCCTGAA
Lotus japonicus genomic DNA, chromosome 1, clone: LjT11G20, TM0187.
AP009955.1:17733-17755
TTCAGGAACAGGAAGAACAATGTCACCTCT17733ATCAGGAGAGATGATAGATAAGCTAGTAATTTTCACTTCAGGATCTAGCGTTT
Lotus japonicus genomic DNA, chromosome 2, clone: LjT38O12, TM0324.
AP009072.1:3664-3686
TTCAGGAACAGGAAGAACAATGTCACCTCT3664ATCAGGAGAGATGATAGATAAGCTAGTAATTTTCACTTCAGGATCTAGCGTTT
Lotus japonicus genomic DNA, chromosome 2, clone: LjB13K21, BM1048.
AP010381.1:79122-79144
TTCAGGAACAGGAAGAACAATGTCACCTCT79122ATCAGGAGAGATGATAGATAAGCTAGTAATTTTCACTTCAGGATCTAGCGTTT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:898734-898756
TTCAGGAACAGGAAGAACAATGTCACCTCT898734ATCAGGAGAGATGATAGATAAGCTAGTAATTTTCACTTCAGGATCTAGCGTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCTTATCTATCATCTCTCCTGAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTTATCTATCATCTCTCCTGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.091 | 0.082 | search_plus_done; http://172.18.8.135:50400/match?q=GCTTATCTATCATCTCTCCTGAT&k=0&no_gap=0&offset=0&limit=50
0.104 | 0.013 | search_minus_done; http://172.18.8.135:50400/match?q=ATCAGGAGAGATGATAGATAAGC&k=0&no_gap=0&offset=0&limit=49
0.107 | 0.003 | cgi_end;

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