GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-20 08:05:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

T135789b shotgun sub-library of BAC clone 60O16 Medicago truncatula genomic clone 60-O-16-C-021, genomic survey sequence.
AQ580189.1:407-436
GGTGAGGCACATACTGAATAACCACAGGAA407GCTTCGTGAGGTGATAGATCTAGAGATGACTCGAAATTCTTACTCCATTCAATCTATATT
T135797b shotgun sub-library of BAC clone 60O16 Medicago truncatula genomic clone 60-O-16-C-029, genomic survey sequence.
AQ580197.1:115-144
GGTGAGGCACATACTGAATAACCACAGGAA115GCTTCGTGAGGTGATAGATCTAGAGATGACTCGAAATTCTTACTCCATTCAATCTATATT
T221227b Medicago truncatula BAC library Medicago truncatula genomic clone 79H20, genomic survey sequence.
AZ758047.1:3-32
AA3GCTTCGTGAGGTGATAGATCTAGAGATGACTCGAAATTCTTACTCCATTCAATCTATATT
Medicago truncatula clone mth2-9i24, complete sequence.
AC126785.11:37151-37180
GGTGAGGCACATACTGAATAACCACAGGAA37151GCTTCGTGAGGTGATAGATCTAGAGATGACTCGAAATTCTTACTCCATTCAATCTATATT
Sequence 33806 from Patent EP2761003.
JC648025.1:836-865
AATATAGATTGAATGGAGTAAGAATTTCGA836GTCATCTCTAGATCTATCACCTCACGAAGCTTCCTGTGGTTATTCAGTATGTGCCTCACC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCTTCGTGAGGTGATAGATCTAGAGATGAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTTCGTGAGGTGATAGATCTAGAGATGAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.185 | 0.177 | search_plus_done; http://172.18.8.135:50400/match?q=GCTTCGTGAGGTGATAGATCTAGAGATGAC&k=0&no_gap=0&offset=0&limit=50
0.279 | 0.094 | search_minus_done; http://172.18.8.135:50400/match?q=GTCATCTCTAGATCTATCACCTCACGAAGC&k=0&no_gap=0&offset=0&limit=46
0.280 | 0.001 | cgi_end;

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