GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 06:32:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus hybrid cultivar cultivar Royalty chromosome 17.
CP141986.1:1115931-1115950
TTCTGTTTTCGACACAAGATTGATAGATTA1115931GCTTCTCGGGTGAGTTTTTCTGTCGAGCAACTGTATGTCTCTCTCTCTCT
Malus hybrid cultivar cultivar SH6 chromosome 17.
CP143374.1:1213671-1213690
TTCTGATTTCGACACAAGATTGATAGATTA1213671GCTTCTCGGGTGAGTTTTTCTGTCGAGCAACTGTATGTCTCTCTCTCTCT
Malus hybrid cultivar cultivar SH6 chromosome 17.
CP143391.1:1269208-1269227
TTCTGATTTTGACACAAGATTGATAGATTA1269208GCTTCTCGGGTGAGTTTTTCTGTCGAGCAACTGTATGTCTCTCTCTCTCT
Malus sylvestris genome assembly, chromosome: 17.
OU696519.1:1243316-1243335
TTCTGTTTTCGACACAAGATTGATAGATTA1243316GCTTCTCGGGTGAGTTTTTCTGTCGAGCAGCTGTATGTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 17.
OU696693.1:1251365-1251384
TTCTGATTTCGACACAAGATTGATAGATTA1251365GCTTCTCGGGTGAGTTTTTCTGTCGAGCAACTGTATGTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 17.
OU744558.1:1255397-1255416
TTCTGATTTCGACACAAGATTGATAGATTA1255397GCTTCTCGGGTGAGTTTTTCTGTCGAGCAACTGTATGTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 17.
OU744969.1:1268937-1268956
TTCTGATTTCGACACAAGATTGATAGATTA1268937GCTTCTCGGGTGAGTTTTTCTGTCGAGCAACTGTATGTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 17.
OU745007.1:1268649-1268668
TTCTGATTTCGACACAAGATTGATAGATTA1268649GCTTCTCGGGTGAGTTTTTCTGTCGAGCAACTGTATGTCTCTCTCTCTCT
Anopheles coustani genome assembly, chromosome: 3.
OX030901.1:14105326-14105345
GTTTTTCACCGCCGGCTTGATAAATCGTTC14105326GCTTCTCGGGTGAGTTTTTCATTGGCATTCGTCTTCTCTTTTTTTCTGCG
Anopheles ziemanni genome assembly, chromosome: 3.
OX030920.2:14105326-14105345
GTTTTTCACCGCCGGCTTGATAAATCGTTC14105326GCTTCTCGGGTGAGTTTTTCATTGGCATTCGTCTTCTCTTTTTTTCTGCG
Malus hybrid cultivar cultivar Flame chromosome 17.
CP141926.1:32893382-32893401
AGAGAGAGAGAGACATACAGTTGCACGACA32893382GAAAAACTCACCCGAGAAGCTAATCTATCAATCTTGTGTCGAAAACAGAA
Malus hybrid cultivar cultivar Flame chromosome 17.
CP141943.1:33726691-33726710
AGAGAGAGAGAGACATACAGTTGCTCGACA33726691GAAAAACTCACCCGAGAAGCTAATCTATCAATCTTGTGTCGAAATCAGAA
Malus x robusta genome assembly, chromosome: 11.
OY720335.1:32939950-32939969
AGAGAGAGAGAGACATACAGTTGCACGACA32939950GAAAAACTCACCCGAGAAGCTAATCTATCAATCTTGTGTCGAAAACAGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCTTCTCGGGTGAGTTTTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTTCTCGGGTGAGTTTTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.099 | 0.090 | search_plus_done; http://172.18.8.135:50400/match?q=GCTTCTCGGGTGAGTTTTTC&k=0&no_gap=0&offset=0&limit=50
0.120 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=GAAAAACTCACCCGAGAAGC&k=0&no_gap=0&offset=0&limit=40
0.122 | 0.002 | cgi_end;

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