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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-05 15:16:04, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Musa acuminata subsp. malaccensis isolate AA chromosome 10.
CP126379.1:36955466-36955485
ATAGGAATTAGGGTTTAGCTTGGGGTACTC36955466GCTTCTCTCCTACAATGGCGGCTGCCACGCTCCACTCCGTACTCCGCCGC
Musa acuminata subsp. malaccensis isolate AA chromosome 10.
CP126379.1:37071447-37071466
ATACGAATTAGGGTTTCGCTTGGGGTGCTC37071447GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCTCCGCCGC
Musa acuminata subsp. malaccensis isolate AA chromosome 21.
CP126390.1:40676807-40676826
ATAGGAATTAGGGTTTAGCTTGGGGTACTC40676807GCTTCTCTCCTACAATGGCGGCTGCCACGCTCCACTCCGTACTCCGCCGC
Musa acuminata subsp. malaccensis isolate AA chromosome 21.
CP126390.1:40792788-40792807
ATACGAATTAGGGTTTCGCTTGGGGTGCTC40792788GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCTCCGCCGC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A10.
HG996476.1:33943782-33943801
ATAGGAATTAGGGTTTCGCTTGGGGTGCTC33943782GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCTCCGCCGC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A10.
HG996476.1:33947178-33947197
ATAGGAATTAGGGTTTCGCTTGGGGTGCTC33947178GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCTCCGCCGC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A10.
HG996476.1:33950883-33950902
ATAGGAATTAGGGTTTCGCTTGGGGTGCTC33950883GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCTCCGCCGC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A10.
HG996476.1:34196927-34196946
ATAGGAATTAGGGTTTAGCTTGGGGTACTC34196927GCTTCTCTCCTACAATGGCGGCTGCCACGCTCCACTCCGTACTCCGCCGC
Aegilops sharonensis genome assembly, chromosome: 5S.
LR880970.1:158344575-158344594
TGGCTGCACGGTGACCTTCGAGGAATATTT158344575GCTTCTCTCCTACAATGGCGTAATCGGATGGATTACTAATTGCAGCGAAT
Musa schizocarpa genome assembly, chromosome: S10.
LS990924.1:37858978-37858997
ATAGGAATTAGGGTTTCGCTTGGGGTGCTC37858978GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCTCCGCCGC
Musa schizocarpa genome assembly, chromosome: S10.
LS990924.1:38086381-38086400
ATAGGAATTAGGGTTTAGCTTGGGGTGCTC38086381GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTACTCCGCCGC
Musa schizocarpa genome assembly, chromosome: S10.
LS990924.1:38198358-38198377
ATAGGAATTAGGGTTTCGCTTGGGGTGCTC38198358GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCTCCGCCGC
Chionographis japonica genome assembly, chromosome: 3.
OX393551.1:74587596-74587615
GTTCCCCCTCTCTCCCCATGTAGATCGGGG74587596GCTTCTCTCCTACAATGGCGTCGATGTTTTTGGGCGCTTATCTCCGGCGA
Musa banksii genome assembly, chromosome: 10.
OZ184661.1:36961011-36961030
ATAAAAATTAGGGTTTCGTTCGGGGTGCTC36961011GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCGCCGCCGC
Musa banksii genome assembly, chromosome: 10.
OZ184661.1:37189448-37189467
ATAGGAATTAGGGTTTCGCTTGGGGTGCTC37189448GCTTCTCTCCTACAATGGCGGCTGCCACGCTCCACTCCGTACTCCGCCGC
Musa banksii genome assembly, chromosome: 10.
OZ184661.1:37215715-37215734
ATAGGAATTAGGGTTTCGCTTGGGGTGCTC37215715GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCTCCGCCGA
Musa banksii genome assembly, chromosome: 10.
OZ184661.1:37347110-37347129
ATAGGAATTAGGGTTTCGCTTGGGGTGCTC37347110GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCTCCGCCGA
Musa acuminata var. zebrina genome assembly, chromosome: 10.
OZ184684.1:39805863-39805882
ATAGGAATTAGGGTTTCGCTTGGGGTGCTC39805863GCTTCTCTCCTACAATGGCGGCTGCCACGCTCCACTCCGTACTCCGCCGC
Musa acuminata var. zebrina genome assembly, chromosome: 10.
OZ184684.1:39903949-39903968
ATAGGAATTAGGGTTTCGCTTGGGGTGCTC39903949GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCTCCGCCGC
Musa hybrid cultivar genome assembly, chromosome: 10.
OZ185489.1:39397832-39397851
ATAGGAATTAGGGTTTCGCTTCGGGTGCTC39397832GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCTCCGCCGC
Musa hybrid cultivar genome assembly, chromosome: 10.
OZ185489.1:39632133-39632152
GTAGGAATTAGGGTTTAGCTTGGGGTGCTC39632133GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTACTCCGCCGC
Musa hybrid cultivar genome assembly, chromosome: 10.
OZ185489.1:39638004-39638023
ATAGGAATTAGGGTTTCGCTTGGGGTGCTC39638004GCTTCTCTCCTACAATGGCGGCTGCCACGCGCCACTCCGTACTCCGCCGC
Musa hybrid cultivar genome assembly, chromosome: 10.
OZ185489.1:39744323-39744342
ATACGAATTAGGGTTTCGCTTGGGGTGCTC39744323GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCTCCGCCGC
Musa hybrid cultivar genome assembly, chromosome: 10.
OZ185501.1:38829564-38829583
ATAAAAATTAGGGTTTCGTTCGGGGTGCTC38829564GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCGCCGCCGC
Musa hybrid cultivar genome assembly, chromosome: 10.
OZ185501.1:39059523-39059542
ATAGGAATTAGGGTTTCGCTTGGGGTGCTC39059523GCTTCTCTCCTACAATGGCGGCTGCCACGCTCCACTCCGTACTCCGCCGC
Musa hybrid cultivar genome assembly, chromosome: 10.
OZ185501.1:39201754-39201773
ATAGGAATTAGGGTTTCGCTTGGGGTGCTC39201754GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCTCCGCCGA
Musa acuminata subsp. burmannicoides genome assembly, chromosome: 10.
OZ193595.1:37262925-37262944
ATAGGAATTAGGGTTTCGCTTGGGGTGCTC37262925GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCTCCGCCGC
Musa acuminata subsp. burmannicoides genome assembly, chromosome: 10.
OZ193595.1:37482765-37482784
ATAGGAATTAGGGTTTAGCTTGGGGTGCTC37482765GCTTCTCTCCTACAATGGCGGCTGCCACGCTCCACTCCGTACTCCGCCGC
Musa acuminata subsp. burmannicoides genome assembly, chromosome: 10.
OZ193595.1:37491920-37491939
ATAGGAATTAGGGTTTAGCTTGGGGTGCTC37491920GCTTCTCTCCTACAATGGCGGCTGCCACGCTCCACTCCGTACTCCGCCGC
Musa acuminata subsp. burmannicoides genome assembly, chromosome: 10.
OZ193595.1:37617669-37617688
ATAGGAATTAGGGTTTCGCTTGGGGTGCTC37617669GCTTCTCTCCTACAATGGCGGCTGCGACTCTCCGCTCCGTCCTCCGCCGC
Seq_sg_08-B24.f MAMB Musa acuminata subsp. malaccensis genomic, genomic survey sequence.
HN246322.1:282-301
GCGGCGGAGGACGGAGCGGAGAGTCGCAGC282CGCCATTGTAGGAGAGAAGCGAGCACCCCAAGCGAAACCCTAATTCCTAT
Musa acuminata subsp. malaccensis isolate AA chromosome 10.
CP126379.1:36784503-36784522
GCGGCGGAGGACGGAGCGGAGAGTCGCAGC36784503CGCCATTGTAGGAGAGAAGCGAGCACCCCGAACGAAACCCTAATTTCTAT
Musa acuminata subsp. malaccensis isolate AA chromosome 21.
CP126390.1:40505844-40505863
GCGGCGGAGGACGGAGCGGAGAGTCGCAGC40505844CGCCATTGTAGGAGAGAAGCGAGCACCCCGAACGAAACCCTAATTTCTAT
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A10.
HG996476.1:34026827-34026846
GCGGCGGAGGACGGAGCGGAGAGTCGCAGC34026827CGCCATTGTAGGAGAGAAGCGAGCACCCCGAACGAAACCCTAATTTCTAT
Musa acuminata var. zebrina genome assembly, chromosome: 10.
OZ184684.1:39637303-39637322
GCGGCGGAGGACGGAGCGGAGAGTCGCAGC39637303CGCCATTGTAGGAGAGAAGCGAGCACCCCAAACGAAACCCTAATTCCTAT
Musa hybrid cultivar genome assembly, chromosome: 10.
OZ185489.1:39465609-39465628
GCGGCGGAGGACGGAGCGGAGAGTCGCAGC39465609CGCCATTGTAGGAGAGAAGCGAGCACCCGAAGCGAAACCCTAATTCCTAT
Chorisops tibialis genome assembly, chromosome: 1.
OY770262.1:144049435-144049454
CAGGAGGACAAGGTCCGATTTGGGCAGTAA144049435CGCCATTGTAGGAGAGAAGCATTTATTAAGGGTAATGGGAGAAGTCCGCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTTCTCTCCTACAATGGCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTTCTCTCCTACAATGGCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.321 | 0.312 | search_plus_done; http://172.18.8.135:50900/match?q=GCTTCTCTCCTACAATGGCG&k=0&no_gap=0&offset=0&limit=50
0.594 | 0.273 | search_minus_done; http://172.18.8.135:50900/match?q=CGCCATTGTAGGAGAGAAGC&k=0&no_gap=0&offset=0&limit=20
0.599 | 0.005 | cgi_end;

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