GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 01:24:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea cultivar Shitouqi chromosome B07.
CP030999.1:24830790-24830809
TAAATCTCCTTTATCTTCTGACTTAGCTTA24830790GCTTGTTTTAATTTGGGCGATTAGACACTAGCTTTTGAGATTTACCTTTC
Arachis ipaensis cultivar K30076 chromosome 07.
CP049898.1:25729560-25729579
TAAATCTCCTTTATCTTCTGACTTAGCTTA25729560GCTTGTTTTAATTTGGGCGATTAGACACTAGCTTTTGAGATTTACCTTTC
Pichia sorbitophila strain CBS 7064 chromosome D complete sequence.
FO082056.1:224374-224393
GAAGTAGTTCTATATACTGGCATGAAAAAT224374GCTTGTTTTAATTTGGGCGAAAGCATATCTCAGAAGGCTGAAACACAATT
Pichia sorbitophila strain CBS 7064 chromosome C complete sequence.
FO082057.1:216900-216919
GAAGTGGTTCTATATACTGGTATGAAAAGT216900GCTTGTTTTAATTTGGGCGAAAGTATCTCCCACAAGGTTGAAACACGATT
Monopis laevigella genome assembly, chromosome: 17.
OX375856.1:4104401-4104420
ACATTTAAACGATTTTTAAGAAATTATCTG4104401GCTTGTTTTAATTTGGGCGAACTAATTGGGAAAAATGGGTAAACTCAATT
Monopis laevigella genome assembly, chromosome: 17.
OX381593.1:4098323-4098342
ATATTTAAACGATTTTTAAGAAAATTCCTG4098323GCTTGTTTTAATTTGGGCGAACTAAATGGGAAAAATGGGTAAACTCAATT
Arachis hypogaea DNA, clone: AHGS47E18.
DH961642.1:497-516
GAAAGGTAAATCTCAAAAGCTAGTGTCTAA497TCGCCCAAATTAAAACAAGCTAAGCTAAGTCAGAAGATAAAGGAGATTTA
Hypena proboscidalis genome assembly, chromosome: 1.
LR990127.1:2351133-2351152
CTAACTCCTACAATCTACTGAGAAATTCCT2351133TCGCCCAAATTAAAACAAGCAATTAACATGTCAAGTCTCTTTGAATATGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCTTGTTTTAATTTGGGCGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTTGTTTTAATTTGGGCGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.110 | 0.102 | search_plus_done; http://172.18.8.135:50400/match?q=GCTTGTTTTAATTTGGGCGA&k=0&no_gap=0&offset=0&limit=50
0.166 | 0.056 | search_minus_done; http://172.18.8.135:50400/match?q=TCGCCCAAATTAAAACAAGC&k=0&no_gap=0&offset=0&limit=44
0.167 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).