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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-06 10:47:48, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Pyrus communis mRNA, contig: lc2018.
FX610605.1:205-224
TCGCTGTAAATCGCCTTGTCTGTTCCCGTG205GCTTTCCAGTAACCCGACACGGTTGCCCGATTCGGGCGTATCCCGTTCGG
TSA: Pyrus x bretschneideri Unigene1834_XinShao mRNA sequence.
JR597201.1:838-857
TCGCTGTAAATCGCCTTGTCTGTTCCCGTG838GCTTTCCAGTAACCCGACACGGTTGCCCGATTCGGGCGTATCCCGTTCGG
TSA: Pyrus x bretschneideri Unigene1835_XinShao mRNA sequence.
JR597202.1:938-957
TCGCTGTAAATCGCCTTGTCTGTTCCCGTG938GCTTTCCAGTAACCCGACACGGTTGCCCGATTCGGGCGTATCCCGTTCGG
TSA: Pyrus x bretschneideri Unigene8425_XinShao mRNA sequence.
JR603553.1:838-857
TCGCTGTAAATCGCCTTGTCTGTTCCCGTG838GCTTTCCAGTAACCCGACACGGTTGCCCGATTCGGGCGTATCCCGTTCGG
TSA: Pyrus x bretschneideri Unigene17429_XinShao mRNA sequence.
JR612226.1:938-957
TCGCTGTAAATCGCCTTGTCTGTTCCCGTG938GCTTTCCAGTAACCCGACACGGTTGCCCGATTCGGGCGTATCCCGTTCGG
Chaenomeles sinensis isolate sampleA chromosome 10.
CP162373.1:29872481-29872500
TCGCTGTAAATCGCCTTGTCTGTTCCCGTG29872481GCTTTCCAGTAACCCGACACGGTTGCCCGATTCGGGCGTACCCCGTTCGG
Rubus idaeus genome assembly, chromosome: 6.
OZ232404.1:3073554-3073573
CCACTGTGAATTGCTTTGTCTGTGCCGGTG3073554GCTTTCCAGTAACCCGACACCGTTGCTCGATTGGGTCGGACGCCATTCGG
Ribes uva-crispa genome assembly, chromosome: 3.
OZ242993.1:94573593-94573612
ATAACACCTTCTCTGGTTTTTCGATACTCT94573593GCTTTCCAGTAACCCGACACGTGTTCGAAGAAAGGCCGAAAGGCTCACCT
TSA: Pyrus communis mRNA, contig: lc2018.
FX610605.1:652-671
CCGAACGGGATACGCCCGAATCGGGCAACC652GTGTCGGGTTACTGGAAAGCCACGGGAACAGACAAGGCGATTTACAGCGA
TSA: Pyrus communis mRNA, contig: lc47999.
FX654373.1:85-104
CCGAACGGGATACGCCCGAATCGGGCAACC85GTGTCGGGTTACTGGAAAGCCACGGGAACAGACAAGGCGATTTACAGCGA
TSA: Nothofagus nervosa isotig01256 mRNA sequence.
JT782815.1:92-111
CCAAATGGGGCGCGGCCAAACAGAGCAACG92GTGTCGGGTTACTGGAAAGCCACAGGCACGGATAAGGCTATCCATAGCGG
Malus hybrid cultivar cultivar Flame chromosome 16.
CP141925.1:4372352-4372371
CCGAACGGGATACGCCCGAATCGGGCAACC4372352GTGTCGGGTTACTGGAAAGCCACGGGAACAGACAAGGCGATTTACAGCGA
Malus hybrid cultivar cultivar SH6 chromosome 16.
CP143390.1:4375660-4375679
CCGAACGGGATACGCCCGAATCGGGCAACC4375660GTGTCGGGTTACTGGAAAGCCACGGGAACAGACAAGGCGATTTACAGCGA
Malus domestica cultivar WA 38 chromosome 16A.
CP165716.1:4372141-4372160
CCGAACGGGATACGCCCGAATCGGGCAACC4372141GTGTCGGGTTACTGGAAAGCCACGGGAACAGACAAGGCGATTTACAGCGA
Malus hupehensis NAC domain protein (NAC120) mRNA, complete cds.
KF198127.1:256-275
CCGAACGGGATACGCCCGAATCGGGCAACC256GTGTCGGGTTACTGGAAAGCCACGGGAACAGACAAGGCGATTTACAGCGA
Buxus sempervirens genome assembly, chromosome: 4.
OX387185.1:46963345-46963364
CCAAATGGGGTGCGACCGAATCGAGCCGCC46963345GTGTCGGGTTACTGGAAAGCTACAGGCACAGATAAGGCAATCCACAGTGG
Crataegus laevigata genome assembly, chromosome: 11.
OY756948.1:4814863-4814882
CCGAACGGGGTCCGCCCGAATCGGGCAACC4814863GTGTCGGGTTACTGGAAAGCCACAGGAACAGACAAGGCGATCTACAGCGA
Pyrus communis genome assembly, chromosome: 4.
OY757071.1:3963035-3963054
CCGAACGGGATACGCCCGAATCGGGCAACC3963035GTGTCGGGTTACTGGAAAGCCACGGGAACAGACAAGGCGATTTACAGCGA
Convolvulus arvensis genome assembly, chromosome: 2.
OZ120369.1:7378645-7378664
CCCAACGGAGTTCGTCCCAACAGGGCAGCC7378645GTGTCGGGTTACTGGAAAGCCACGGGCACGGACAAGGCGATCTATAGTGG
Rubus caesius genome assembly, chromosome: 7.
OZ174136.1:39065560-39065579
CCGAATGGCGTCCGACCCAATCGAGCAACG39065560GTGTCGGGTTACTGGAAAGCCACCGGCACAGACAAAGCAATTCACAGCGG
Rubus caesius genome assembly, chromosome: 11.
OZ174140.1:34608067-34608086
CCGAATGGAGTCCGACCCAATCGAGCAACG34608067GTGTCGGGTTACTGGAAAGCCACCGGCACAGACAAAGCAATTCACAGTGG
Ranunculus sardous genome assembly, chromosome: 8.
OZ222634.1:278568274-278568293
CAAGAGCACGGGAGAGTTCCCAGATCCGAC278568274GTGTCGGGTTACTGGAAAGCGGTACGGAAAACGGAAGAATCGGGGATTCT
Hottonia palustris genome assembly, chromosome: 2.
OZ250776.1:29205293-29205312
ACCCAAATGGAGCGGCCAAATAGATCAGCT29205293GTGTCGGGTTACTGGAAAGCTACAGGGACAAATACGTCAATTAACAGTGG
Hottonia palustris genome assembly, chromosome: 2.
OZ250786.1:28340680-28340699
ACCCAAATGGAGCGGCCAAATAGATCAGCT28340680GTGTCGGGTTACTGGAAAGCTACAGGGACAAATACGTCAATTAACAGTGG
Karpatiosorbus bristoliensis genome assembly, chromosome: 6C.
OZ287410.1:4333604-4333623
CCGAACGGGATACGCCCGAATCGGGCAACC4333604GTGTCGGGTTACTGGAAAGCCACGGGAACAGACAAGGCGATTTACAGCGA
Karpatiosorbus bristoliensis genome assembly, chromosome: 6A.
OZ287451.1:4338097-4338116
CCGAACGGGATACGCCCGAATCGGGCAACC4338097GTGTCGGGTTACTGGAAAGCCACGGGAACAGACAAGGCGATTTACAGCGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTTTCCAGTAACCCGACAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTTTCCAGTAACCCGACAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.322 | 0.313 | search_plus_done; http://172.18.8.135:50900/match?q=GCTTTCCAGTAACCCGACAC&k=0&no_gap=0&offset=0&limit=50
0.540 | 0.218 | search_minus_done; http://172.18.8.135:50900/match?q=GTGTCGGGTTACTGGAAAGC&k=0&no_gap=0&offset=0&limit=42
0.552 | 0.012 | cgi_end;

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