GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 08:47:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 536 from patent US 9456561.
KH269128.1:19-42
TGTAAAACGACGGCCAGT19GGAAAGAATATGCAATTTCTCGAT
Trifolium pratense DNA, clone:RCG01427.
DE213248.1:5-28
GAAT5GGAAAGAATATGCAATTTCTCGATAAAGTAATTTGTTTTGGAATTTTTCTTTTG
Trifolium pratense DNA, clone:RCG01654.
DE213430.1:5-28
GAAT5GGAAAGAATATGCAATTTCTCGATAAAGTAATTTGTTTTGGAATTTTTCTTTTG
Trifolium pratense DNA, clone:RCG02650.
DE214227.1:5-28
GAAT5GGAAAGAATATGCAATTTCTCGATAAAGTAATTTGTTTTGGAATTTTTCTTTTG
Trifolium pratense DNA, clone:RCG03023.
DE214523.1:5-28
GAAT5GGAAAGAATATGCAATTTCTCGATAAAGTAATTTGTTTTGGAATTTTTCTTTTG
Trifolium pratense DNA, clone:RCG03912.
DE215256.1:5-28
GAAT5GGAAAGAATATGCAATTTCTCGATAAAGTAATTTGTTTTGGAATTTTTCTTTTG
Trifolium pratense DNA, clone:RCG01096.
DE246735.1:5-28
GAAT5GGAAAGAATATGCAATTTCTCGATAAAGTAATTTGTTTTGGAATTTTTCTTTTG
Trifolium pratense DNA, clone:RCG02156.
DE213837.1:156-179
CAAAAGAAAAATTCCAAAACAAATTACTTT156ATCGAGAAATTGCATATTCTTTCCATTC
Trifolium pratense DNA, clone:RCG02863.
DE214397.1:156-179
CAAAAGAAAAATTCCAAAACAAATTACTTT156ATCGAGAAATTGCATATTCTTTCCATTC
Trifolium pratense DNA, clone:RCG04328.
DE215604.1:210-233
CAAAAGAAAAATTCCAAAACAAATTACTTT210ATCGAGAAATTGCATATTCTTTCCATTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGAAAGAATATGCAATTTCTCGAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAAAGAATATGCAATTTCTCGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.216 | 0.207 | search_plus_done; http://172.18.8.135:50400/match?q=GGAAAGAATATGCAATTTCTCGAT&k=0&no_gap=0&offset=0&limit=50
0.310 | 0.093 | search_minus_done; http://172.18.8.135:50400/match?q=ATCGAGAAATTGCATATTCTTTCC&k=0&no_gap=0&offset=0&limit=43
0.312 | 0.002 | cgi_end;

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