GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-26 09:22:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Vigna angularis mRNA, clone: VEPS02J10.
HX939421.1:695-715
GAGAAAAGAAGTTTGCAAGTATTTGCAAAT695GGAACACTGTGTGCAAGATCAATCAATCATACGTGTGTTCTATCAGAGAGT
Vigna angularis mRNA, clone: VEPS11_J18.
HX942699.1:285-305
GAGAAAAGAAGTTTGCAAGTATTTGCAAAT285GGAACACTGTGTGCAAGATCAATCAATCATACGTGTGTTCTATCAGAGAGT
Vigna radiata VCAX1 mRNA for Ca2+/H+ exchanger, complete cds.
AB012932.1:1692-1712
GAGAAAAGAAGTGTGCAAGTATTTGCAAAT1692GGAACACTGTGTGCAAGATCAATCAATCATACGTGTGTTCTATCAGAGAGT
Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
AP015037.1:17202766-17202786
GAGAAAAGAAGTTTGCAAGTATTTGCAAAT17202766GGAACACTGTGTGCAAGATCAATCAATCATACGTGTGTTCTATCAGAGAGT
Vigna angularis mRNA, clone: VES09L01.
HX945742.1:274-294
ACTCTCTGATAGAACACACGTATGATTGAT274TGATCTTGCACACAGTGTTCCATTTGCAAATACTTGCAAACTTCTTTTCTC
Vigna angularis mRNA, clone: VES10B17.
HX945897.1:274-294
ACTCTCTGATAGAACACACGTATGATTGAT274TGATCTTGCACACAGTGTTCCATTTGCAAATACTTGCAAACTTCTTTTCTC
Secale cereale genome assembly, chromosome: 1R.
LR738709.1:539556126-539556146
ACAGGATTACTCTATTAGCGATGTATATCA539556126TGATCTTGCACACAGTGTTCCCTGGTCATCGTAGGCCAAGGTTGCACCATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGAACACTGTGTGCAAGATCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAACACTGTGTGCAAGATCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.336 | 0.328 | search_plus_done; http://172.18.8.135:50400/match?q=GGAACACTGTGTGCAAGATCA&k=0&no_gap=0&offset=0&limit=50
0.515 | 0.178 | search_minus_done; http://172.18.8.135:50400/match?q=TGATCTTGCACACAGTGTTCC&k=0&no_gap=0&offset=0&limit=46
0.517 | 0.002 | cgi_end;

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