GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-19 06:53:35, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cucumis melo genomic scaffold, anchoredscaffold00003.
LN681847.1:8901217-8901237
GAAAAAGATCGCCGATTAAATCGAATCTCC8901217GGAACAGACACCTCTTCTGAGAAATCTAGATAGAGAGTAAGAGAAAGAGAT
Cucumis melo genomic chromosome, chr_5.
LN713259.1:28180746-28180766
GAAAAAGATCGCCGATTAAATCGAATCTCC28180746GGAACAGACACCTCTTCTGAGAAATCTAGATAGAGAGTAAGAGAAAGAGAT
UNVERIFIED: Cucumis melo subsp. melo clone DOUBLON_Contig331 genomic sequence.
MW591951.1:6684022-6684042
GAAAAAGATCGCCGATTAAATCGAATCTCC6684022GGAACAGACACCTCTTCTGAGAAATCTAGATAGAGAGTAAGAGAAAGAGAT
UNVERIFIED: Cucumis melo subsp. melo clone ANSO77_Contig_104 genomic sequence.
MW591952.1:6780329-6780349
GAAAAAGATCGCCGATTAAATCGAATCTCC6780329GGAACAGACACCTCTTCTGAGAAATCTAGATAGAGAGTAAGAGAAAGAGAT
Cucumis melo subsp. melo EST, clone HS_03-C05-M13R.
AM724040.2:86-106
ATCTCTTTCTCTTACTCTCTATCTAGATTT86CTCAGAAGAGGTGTCTGTTCCGGAGATTCGATTTAATCGGCGATCTTTTAC
Cucumis melo subsp. melo EST, clone HS_17-C10-M13R.
AM726072.1:85-105
ATCTCTTTCTCTTACTCTCTATCTAGATTT85CTCAGAAGAGGTGTCTGTTCCGGAGATTCGATTTAATCGGCGATCTTTTTC
Cucumis melo isolate PI 511890 chromosome 5.
CP136110.1:175695-175715
ATCTCTTTCTCTTACTCTCTATCTAGATTT175695CTCAGAAGAGGTGTCTGTTCCGGAGATTCGATTTAATCGGCGATCTTTTTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGAACAGACACCTCTTCTGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAACAGACACCTCTTCTGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.108 | 0.099 | search_plus_done; http://172.18.8.135:50800/match?q=GGAACAGACACCTCTTCTGAG&k=0&no_gap=0&offset=0&limit=50
0.137 | 0.029 | search_minus_done; http://172.18.8.135:50800/match?q=CTCAGAAGAGGTGTCTGTTCC&k=0&no_gap=0&offset=0&limit=46
0.139 | 0.002 | cgi_end;

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