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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:28:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Nannobrachium achirus genome assembly, chromosome: 7.
OY997644.1:34018429-34018448
TATTCAACTTGGGGGTGGGGGGGGCTATTA34018429GGAACGTTTCATGGCATTCTAGGGGGTCTTCCAAATTAATAATGCGAGAT
QGD5H21.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGD5H21, mRNA sequence.
BQ869210.1:188-207
TGAGAAGCTAAAAGTATTCAAAAACATGTT188GGAACGTTTCATGGCATTCTTACAGATCCAAAAGCACAACATTTTAGCCA
QGD6P10.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGD6P10, mRNA sequence.
BQ869702.1:325-344
TGAGAAGCTAAAAGTATTCAAAAACATGTT325GGAACGTTTCATGGCATTCTTACAGATCCAAAAGCACAACATTTTAGCCA
QGD9F10.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGD9F10, mRNA sequence.
BQ870539.1:534-553
TGAGAAGCTAAAAGTATTCAAAAACATGTT534GGAACGTTTCATGGCATTCTTACAGATCCAAAAGCACAACATTTTAGCCA
QGI7F08.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGI7F08, mRNA sequence.
BQ875159.1:324-343
TGAGAAGCTAAAAGTATTCAAAAACATGTT324GGAACGTTTCATGGCATTCTTACAGATCCAAAAGCACAACATTTTAGCCA
QGG16M19.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGG16M19, mRNA sequence.
BQ997563.1:187-206
TGAGAAGCTAAAAGTATTCAAAAACATGTT187GGAACGTTTCATGGCATTCTTACAGATCCAAAAGCACAACATTTTAGCCA
QGG18A14.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGG18A14, mRNA sequence.
BQ997997.1:326-345
TGAGAAGCTAAAAGTATTCAAAAACATGTT326GGAACGTTTCATGGCATTCTTACAGATCCAAAAGCACAACATTTTAGCCA
QGG22N11.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGG22N11, mRNA sequence.
BQ999709.1:217-236
TGAGAAGCTAAAAGTATTCGAAAACATGTT217GGAACGTTTCATGGCATTCTTACAGATCCAAAAGCACAACATTTTAGCCA
QGG33A05.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGG33A05, mRNA sequence.
BU002792.1:147-166
GGAGAAGCTGAGAATATTCAAAAACATGTT147GGAACGTTTCATGGCATTCTTACAAATCCAAAAGCACAACATTTTAGTCA
QGH6J10.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGH6J10, mRNA sequence.
BU008126.1:188-207
TGAGAAGCTAAAAGTATTCAAAAACATGTT188GGAACGTTTCATGGCATTCTTACAGATCCAAAAGCACAACATTTTAGCCA
CLRX5788.b2_G07.ab1 CLR(XYZ) lettuce serriola Lactuca serriola cDNA clone CLRX5788, mRNA sequence.
DW108463.1:479-498
TGAGAAGCTGAGAATATTCAAAAACATGTT479GGAACGTTTCATGGCATTCTTACAAATCCAAAAGCACAACATTTTAGTCA
CLSX5524.b1_H13.ab1 CLS(XYZ) lettuce sativa Lactuca sativa cDNA clone CLSX5524, mRNA sequence.
DW128703.1:803-822
TGAGAAGCTAAAAGTATTCAAAAACATGTT803GGAACGTTTCATGGCATTCTTACAGATCCAAAAGCACAACATTTTAGCCA
CLSM7396.b1_H01.ab1 CLS(LMS) lettuce sativa Lactuca sativa cDNA clone CLSM7396, mRNA sequence.
DY973709.1:202-221
TGAGAGGCTGAGAATATTCAAAAACATGTT202GGAACGTTTCATGGCATTCTTACAAATCCAAAAGCACAACATTTTAGTCA
CLSM8380.b1_H08.ab1 CLS(LMS) lettuce sativa Lactuca sativa cDNA clone CLSM8380, mRNA sequence.
DY974700.1:35-54
CTTGAGAAGCTAAAGTATTCAAAACATGTT35GGAACGTTTCATGGCATTCTTACAGATCCAAAAGCACAACATTTTAGCCA
TSA: Lactuca sativa Letassy_X1_8319 mRNA sequence.
JI583035.1:1256-1275
TGAGAGGCTGAGAATATTCAAAAACATGTT1256GGAACGTTTCATGGCATTCTTACAAATCCAAAAGCACAACATTTTAGTCA
TSA: Lactuca sativa Letassy_A1_9504 mRNA sequence.
JI586246.1:491-510
TGAGAGGCTGAGAATATTCAAAAACATGTT491GGAACGTTTCATGGCATTCTTACAAATCCAAAAGCACAACATTTTAGTCA
TSA: Lactuca serriola Serrassy_T_P2_54336 mRNA sequence.
JO025509.1:1254-1273
TGAGAAGCTGAGAATATTCAAAAACATGTT1254GGAACGTTTCATGGCATTCTTACAAATCCAAAAGCACAACATTTTAGTCA
TSA: Lactuca sativa Letassy_X1_18193 mRNA sequence.
JI574172.1:2224-2243
TGGCTAAAATGTTGTGCTTTTGGATCTGTA2224AGAATGCCATGAAACGTTCCAACATGTTTTTGAATACTTTTAGCTTCTCA
TSA: Lactuca serriola Serrassy_T_P2_61797 mRNA sequence.
JO021569.1:2226-2245
TGGCTAAAATGTTGTGCTTTTGGATCTGTA2226AGAATGCCATGAAACGTTCCAACATGTTTTTGAATACTTTTAGCTTCTCA
Lactuca saligna genome assembly, chromosome: 5.
OX465081.1:85399835-85399854
TGACTAAAATGTTGTGCTTTTGGATTTGTA85399835AGAATGCCATGAAACGTTCCAACATGTTTTTGAATATTCTCAGCTTCTCA
Lactuca saligna genome assembly, chromosome: 5.
OX465081.1:85419808-85419827
TGGCTAAAATGTTGTGCTTTTGGATCTGTA85419808AGAATGCCATGAAACGTTCCAACATGTTTTTGAATACTTTTAGCTTCTCA
Sesia apiformis genome assembly, chromosome: 11.
OU611958.1:5223660-5223679
GTCTAGAGCCGACTTTATCTTACCTCACAA5223660AGAATGCCATGAAACGTTCCAATTTTACAGTTTACAGTTTAGTAAACATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGAACGTTTCATGGCATTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAACGTTTCATGGCATTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.595 | 0.587 | search_plus_done; http://172.18.8.135:50400/match?q=GGAACGTTTCATGGCATTCT&k=0&no_gap=0&offset=0&limit=50
0.701 | 0.106 | search_minus_done; http://172.18.8.135:50400/match?q=AGAATGCCATGAAACGTTCC&k=0&no_gap=0&offset=0&limit=33
0.705 | 0.004 | cgi_end;

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