GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 14:55:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pipistrellus pipistrellus genome assembly, chromosome: 16.
LR862372.1:40628074-40628091
CTGGGTTGGGTTTTACAAGTTGTGCGTTGG40628074GGAAGCACATCGAACCCTAGGTCCCTGGGTGCTGCTCCTACTGCTTTT
Pipistrellus nathusii genome assembly, chromosome: 16.
OY882873.1:41483471-41483488
CTGGGTTGGGTTTTACAAGTTGTGCGTTGG41483471GGAAGCACATCGAACCCTAGGTCCCTCGGTGCTGCTCCTACTGCTTTT
Pipistrellus nathusii genome assembly, chromosome: 16.
OY883193.1:41742449-41742466
CTGGGTTGGGTTTTACAAGTTGTGCGTTGG41742449GGAAGCACATCGAACCCTAGGTCCCTCGGTGCTGCTCCTACTGCTTTT
Symphodus melops genome assembly, chromosome: 5.
OX393529.1:24829151-24829168
AATCCATTCATACACCTTCACCAAAGCAGA24829151GGAAGCACATCGAACCCTCGACATTTCAGTTGAGAGGTGATGACTCGA
Trifolium repens isolate ACLI19 chromosome 07_0cc.
CP125848.1:13291827-13291844
TTCTGTGATGTTAACCAAGACATTCCGAAG13291827GGAAGCACATCGAACCCTCGACACAAGAGTGTGATCGGATTTCTTGCG
Trifolium repens isolate ACLI19 chromosome 07_Pall.
CP125849.1:14433560-14433577
TTCTGTGATGTTAACCAAGACATTCCGAAG14433560GGAAGCACATCGAACCCTCGACACAAGAGTGTGATCGGATTTCTTGCG
Paspalum notatum var. saurae isolate R1 chromosome 07.
CP144751.1:38205735-38205752
CAGAATTCCACGGCTAATCAATCGCGATAC38205735GGAAGCACATCGAACCCTTGACAGTTGAACCGATAGCCGTTCGGACCA
Fibrella sp. ES10-3-2-2, complete genome.
CP015317.1:4174728-4174745
ATAGCAATACAACGTAGAGGTCTATGCACA4174728GGAAGCACATCGAACCCTATTTCTATCTGTACTGAGTTACACGCGTGT
Streptomyces yunnanensis strain P86 chromosome, complete genome.
CP095749.1:3055931-3055948
GGTCATCGAGCCTACGGCACCCGGGTTGCC3055931GGAAGCACATCGAACCCTGACGCCCCTCGAAAGGGGGCGGCCGGGCAC
Syritta pipiens genome assembly, chromosome: 2.
LR994572.1:74502996-74503013
TTCAAGTGCTGTCTTACGTCCAGGCTCTCT74502996GGAAGCACATCGAACCCTCGATGAAAGTAAGTTCGTTGTGCGTTTTCA
Sabethes cyaneus genome assembly, chromosome: 2.
OX030888.1:108061691-108061708
TTCTATGAGAAGTTAAACCGATTTCATAAT108061691GGAAGCACATCGAACCCTGATTGTATTTCACTATTTCTAATTCCCGTA
Erpetoichthys calabaricus genome assembly, chromosome: 10.
LR536441.2:164732403-164732420
CGTGTACGTCGTCTTCAGATCACTTCGAAA164732403AGGGTTCGATGTGCTTCCTGCAGTAGCTGAGTGACTTCAGTCAACCAC
Geotrypetes seraphini genome assembly, chromosome: 8.
LR699153.1:115468884-115468901
ATCTCTTGACAAGTGATAGGAGCATTAAGT115468884AGGGTTCGATGTGCTTCCGAGGCACTCGGGAGATTCAAATCGTGAAAG
EST0099 Trifolium purpureum cDNA Trifolium purpureum cDNA clone T 168 similar to UDP-D-glucuronate carboxy-lyase, mRNA sequence.
BU576946.1:64-81
CGCAAGAAATCCGATCATGCTCTTGTGTCG64AGGGTTCGATGTGCTTCCCTTCGGAATATCTTGGTTAACCTCCAAGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGAAGCACATCGAACCCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAAGCACATCGAACCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.127 | 0.118 | search_plus_done; http://172.18.8.135:50400/match?q=GGAAGCACATCGAACCCT&k=0&no_gap=0&offset=0&limit=50
0.191 | 0.064 | search_minus_done; http://172.18.8.135:50400/match?q=AGGGTTCGATGTGCTTCC&k=0&no_gap=0&offset=0&limit=39
0.193 | 0.002 | cgi_end;

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