GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 14:57:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

gmrtDrNS01_09-B_M13R_G06_036.s1 Water stressed 5h segment 1 gmrtDrNS01 Glycine max cDNA 3', mRNA sequence.
CX702810.1:757-776
GTGTCTTTGTGCTAAACATAAATCTCGCTA757GGAATACAACCGATGCAGCCACCAAAGACGGCAAAAACTTTATACAATTA
gmrtDrNS01_12-D_M13R_G11_083.s1 Water stressed 5h segment 1 gmrtDrNS01 Glycine max cDNA 3', mRNA sequence.
CX709884.1:757-776
GTGTCTTTGTGCTAAACATAAATCTCGCTA757GGAATACAACCGATGCAGCCACCAAAGACGGCAAAAACTTTTAACAATTA
Glycine max cultivar Williams 82 chromosome 14.
CP126439.1:7724056-7724075
GTGTCTTTGTGCTAAACATAAATCTCGCTA7724056GGAATACAACCGATGCAGCCACCAAAGACGGCAAAAACTTTATACAATTA
sao97d08.y1 Gm-c1081 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1081-3639 5' similar to TR:Q40492 Q40492 CYCLIN A-LIKE PROTEIN, mRNA sequence.
BQ453200.1:20-39
AGTTTTTGCCGTCTTTGGT20GGCTGCATCGGTTGTATTCCTAGCGAGATTTATGTTTAGCACAAAGACAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGAATACAACCGATGCAGCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAATACAACCGATGCAGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.179 | 0.170 | search_plus_done; http://172.18.8.135:50400/match?q=GGAATACAACCGATGCAGCC&k=0&no_gap=0&offset=0&limit=50
0.215 | 0.036 | search_minus_done; http://172.18.8.135:50400/match?q=GGCTGCATCGGTTGTATTCC&k=0&no_gap=0&offset=0&limit=47
0.216 | 0.001 | cgi_end;

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