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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-12 00:33:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 1, clone: LjT37G03, TM0675.
AP007507.2:83961-83983
TATATTCTAACTAGTTATATATAATCAGAT83961GGAATATCATCTTAGCATTGGGATATATATATACCATTCCCAAGTGCTAATAT
Lotus japonicus genomic DNA, chromosome 1, clone: LjB70O07, BM1196.
AP007888.2:147824-147846
TATATTCTAACTAGTTATATATAATCAGAT147824GGAATATCATCTTAGCATTGGGATATATATATACCATTCCCAAGTGCTAATAT
Lotus japonicus genomic DNA, clone: LjB22L24, BM2254.
AP011539.1:62343-62365
TATATTCTAACTAGTTATATATAATCAGAT62343GGAATATCATCTTAGCATTGGGATATATATATACCATTCCCAAGTGCTAATAT
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:27182456-27182478
TATATTCTAACTAGTTATATATAATCAGAT27182456GGAATATCATCTTAGCATTGGGATATATATATACCATTCCCAAGTGCTAATAT
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:44034040-44034062
ATTCTAACTAGTTTATATATATAATCAGAT44034040GGAATATCATCTTAGCATTGGGATATATATATACCATTCCCAAGTGCTAATAT
Lotus japonicus genomic DNA, chromosome 4, clone: LjT06J02, TM1251.
AP007930.1:1810-1832
ATATTAGCACTTGGGAATGGTATATATATA1810TCCCAATGCTAAGATGATATTCCATCTGATTATATATAACTAGTTAGAATATA
Lotus japonicus genomic DNA, chromosome 5, clone: LjB08F01, BM1728.
AP010283.1:34581-34603
ATATTAGCACTTGGGAATGGTATATATATA34581TCCCAATGCTAAGATGATATTCCATCTGATTATATATATAAACTAGTTAGAAT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:16400713-16400735
ATATTAGCACTTGGGAATGGTATATATATA16400713TCCCAATGCTAAGATGATATTCCATCTGATTATATATAACTAGTTAGAATATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGAATATCATCTTAGCATTGGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAATATCATCTTAGCATTGGGA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.252 | 0.243 | search_plus_done; http://172.18.8.135:50400/match?q=GGAATATCATCTTAGCATTGGGA&k=0&no_gap=0&offset=0&limit=50
0.363 | 0.111 | search_minus_done; http://172.18.8.135:50400/match?q=TCCCAATGCTAAGATGATATTCC&k=0&no_gap=0&offset=0&limit=45
0.365 | 0.002 | cgi_end;

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