GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 20:04:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Allium cepa CUDHLF2_8077 mRNA sequence.
JR850895.1:456-476
AAAAACTTATCAGAAAAGTTAGAGGCAGGA456GGAATTGAGCACAAGCTATGGATTGAACAACCTGAGAACATACCAACTTGC
Allium cepa genome assembly, chromosome: 5.
LR994633.1:122464038-122464058
AAAAACTTATCAGAAAAGTTAGAGGCAGGA122464038GGAATTGAGCACAAGCTATGGATTGAACAACCTGAGAACATACCAACTTGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGAATTGAGCACAAGCTATGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAATTGAGCACAAGCTATGG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.121 | 0.113 | search_plus_done; http://172.18.8.135:50400/match?q=GGAATTGAGCACAAGCTATGG&k=0&no_gap=0&offset=0&limit=50
0.147 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=CCATAGCTTGTGCTCAATTCC&k=0&no_gap=0&offset=0&limit=48
0.147 | 0.000 | cgi_end;

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