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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:50:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Canis lupus familiaris breed Labrador retriever chromosome 31a.
CP050592.1:34941083-34941101
AACCAGCACATATGTCCAGACAAATCTGTG34941083GGACACCTCAACTCCATGACTTTTCCAAATGAGCATTTATTTACTGCTC
Canis lupus familiaris breed Labrador retriever chromosome 31b.
CP050617.1:34931613-34931631
AACCAGCACATATGTCCAGACAAATCTGTG34931613GGACACCTCAACTCCATGACTTTTCCAAATGAGCATTTATTTACTGCTC
Meles meles genome assembly, chromosome: 21.
OV277462.1:17997513-17997531
CAATAGATAGGAGACTGACTCTGGCTTTGG17997513GGACACCTCAACTCCATGACTGATGATCTCACCTGTTTGAGGCCCCCAA
Meles meles genome assembly, chromosome: 21.
OV277462.1:18362906-18362924
CAATAGATAGGAGACTGACTCTGGCTTTGG18362906GGACACCTCAACTCCATGACTGATGATCTCACCTGTTTGAGGCCCCCAA
Coregonus sp. 'balchen' genome assembly, chromosome: 28.
LR778280.1:36978749-36978767
TGCAACCAGTCAGGTGGCTCTATCAGCGGT36978749GGACACCTCAACTCCATGACTAGTTTGAAATCCCTCCTGCAGCATCCGA
Larimichthys crocea genome assembly, chromosome: XVI.
LT972182.1:14870104-14870122
TCTTTGCTCACCTCTCACGACAACAGTCCA14870104GGACACCTCAACTCCATGAAAGTATGGAAAGAACTGTCAGTCAGGATAA
Prunus dulcis DNA, pseudomolecule Pd03.
AP019299.1:15397963-15397981
ACCAGAAATCTGATCACCCACGCCTGCGCT15397963GGACACCTCAACTCCATGAACTGTTTGTTGAAGCTGTTGAAAGTCTTGG
Diabrotica balteata genome assembly, chromosome: 4.
OU898279.1:136565431-136565449
AGGATAAGGTGCATGTCATTTTTACAATGG136565431GGACACCTCAACTCCATGACTTGACGACAATCATGATGACAACACGTCA
Canis lupus genome assembly, chromosome: 31.
HG994411.1:4635889-4635907
GAGCAGTAAATAAATGCTCATTTGGAAAAG4635889TCATGGAGTTGAGGTGTCCCACAGATTTGTCTGGACATATGTGCTGGTT
Meles meles genome assembly, chromosome: 21.
OV277462.1:18182168-18182186
TTGGGGGCCTCAAACAGGTGAGATCATCAG18182168TCATGGAGTTGAGGTGTCCCCAAAGCCAGAGTCAGTCTCCTATCTATTG
Meles meles genome assembly, chromosome: 21.
OV277462.1:18547514-18547532
TTGGGGGCCTCAAACAGGTGAGATCATCAG18547514TCATGGAGTTGAGGTGTCCCCAAAGCCAGAGTCAGTCTCCTATCTATTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGACACCTCAACTCCATGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGACACCTCAACTCCATGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.130 | 0.122 | search_plus_done; http://172.18.8.135:50400/match?q=GGACACCTCAACTCCATGA&k=0&no_gap=0&offset=0&limit=50
0.154 | 0.024 | search_minus_done; http://172.18.8.135:50400/match?q=TCATGGAGTTGAGGTGTCC&k=0&no_gap=0&offset=0&limit=42
0.156 | 0.002 | cgi_end;

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