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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 22:11:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

DD30 Fusarium graminearum Differential Display library Fusarium graminearum cDNA, mRNA sequence.
DY588277.1:351-375
AAAGATGGGCAGGGAAGTATGGAGATTGGA351GGACGGTGCTTTAGTGAGGGTTAATAAAGGGCGAATTC
Gp-DD3_B77 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905339.1:28-52
GCGTCGANGGGCCCGGGATCCGATTGC28GGACGGTGCTTTAGTGAGGGTTAATAAGGNCNTTATGCTGGTGATATCTTTTTTT
Gp-DD3_B77 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905339.1:207-231
CNTTNTGCTNAGTGATNTCTTTTTTTTTGC207GGACGGTGCTTTAGTGAGGGTTAATAGGGTCATTATGCTGANTGATATCTTTTTT
Gp-DD3_B80 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905342.1:25-49
TAGATTGGGTAGGACTGGTCATCT25GGACGGTGCTTTAGTGAGGGTTAATAGCTGGACGGTGCTTTAGTGGGGGTTAATA
Gp-DD3_B80 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905342.1:83-107
TGGACGGTGCTTTAGTGGGGGTTAATAGCT83GGACGGTGCTTTAGTGAGGGTTAATAGCACTGGTCATCTGGGGGTAGGACTGGTC
Gp-DD3_B80 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905342.1:143-167
TGGTCATCTGGGGGTAGGACTGGTCATCTT143GGACGGTGCTTTAGTGAGGGTTAATACTGGTCATCTGGGGGTAGGACGGTGCTTT
Gp-DD3_B80 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905342.1:186-210
GTGAGGGTTAATACTGGTCATCTGGGGGTA186GGACGGTGCTTTAGTGAGGGTTAATAGCACTGGTCATCTGGGGGTAGGACTGGTC
Gp-DD3_B80 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905342.1:368-392
GTCATCTGGGGGTAGGACTGGTCATCTATA368GGACGGTGCTTTAGTGAGGGTTAATACTGGTCATCTGGGGGTAGGACTGNTNNAT
Gp-DD3_B80 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905342.1:428-452
TCATCTGGGGGTAGGACTGNTNNATCTATA428GGACGGTGCTTTAGTGAGGGTTAATAATCGGNTCCNGNCCGTCGA
Gp-DD3_B82 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905344.1:63-87
ATTATATGCTGAGTGATATCTTTTTTTTTA63GGACGGTGCTTTAGTGAGGGTTAATAGTGATCATTATGCTGAGTGATATCTTTTT
Gp-DD3_B82 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905344.1:123-147
TCATTATGCTGAGTGATATCTTTTTTTTTG123GGACGGTGCTTTAGTGAGGGTTAATAGTGATCATTATGCTGAGTGATATCTTTTT
Gp-DD3_B82 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905344.1:183-207
TCATTATGCTGAGTGATATCTTTTTTTTTA183GGACGGTGCTTTAGTGAGGGTTAATATCGCTCATTATGCTGAGTGATATCTTTTT
Gp-DD3_B82 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905344.1:299-323
TCATTATGCTGAGTGATATCTTTTTTTTTA299GGACGGTGCTTTAGTGAGGGTTAATATCACTCNNTATGCTGAGTGATATCTTTTT
Baha-cemb05 Differential display of roselle genotype, root Hibiscus sabdariffa cDNA clone P10T8-c 3', mRNA sequence.
JK757803.1:354-378
AATATCATCAGAGAAATTTTGTCTTCAGTT354GGACGGTGCTTTAGTGAGGGTTAATA
Cocos nucifera partial mRNA for hypothetical protein (ORF1).
AM076491.1:341-365
GGTGAAATCCAGCCACAGAAAGGTTGGTTT341GGACGGTGCTTTAGTGAGGGTTAATAA
Cocos nucifera partial mRNA for alpha tubulin (CGTU gene).
AM167526.1:315-339
GGAGGTTGGTGCTGAGTCTGCTGAGGATGA315GGACGGTGCTTTAGTGAGGGTTAATAATCAC
Homo sapiens cig64 mRNA, partial sequence.
AF026945.1:8-32
TCCGATT8ATTAACCCTCACTAAAGCACCGTCCAAGTTTATTTGTGGCATTTTATGACTACCA
Sequence 10 from patent US 6593084.
AR353571.1:1-25
1ATTAACCCTCACTAAAGCACCGTCC
Sequence 3 from Patent WO0078950.
AX080445.1:15-39
CTGGAATTCGGCTT15ATTAACCCTCACTAAAGCACCGTCCTTACAAGTGGCTCCATTTTGGCATGGCTGA
Sequence 36 from Patent WO0240666.
AX431403.1:1-25
1ATTAACCCTCACTAAAGCACCGTCC
JP 2004512852-A/27: Fat Regulated Genes, Uses Thereof, and Compounds for Modulating Same.
DD010089.1:1-25
1ATTAACCCTCACTAAAGCACCGTCC
JP 2003235570-A/10: Polypeptide having interaction with hibernation-specific protein and its utilization.
DJ389558.1:1-25
1ATTAACCCTCACTAAAGCACCGTCC
Sequence 28 from patent US 8318422.
GZ598054.1:183-207
TTTAATTTTACTACCGATCAACTCTTTTTT183ATTAACCCTCACTAAAGCACCGTCCATCGGCGTCCACCGAATATAGGCACCATAA
Sequence 18 from patent US 8349562.
GZ703055.1:1-25
1ATTAACCCTCACTAAAGCACCGTCC
Sequence 28 from patent US 8349816.
GZ704093.1:183-207
TTTAATTTTACTACCGATCAACTCTTTTTT183ATTAACCCTCACTAAAGCACCGTCCATCGGCGTCCACCGAATATAGGCACCATAA
Sequence 18 from patent US 9109258.
HL076167.1:1-25
1ATTAACCCTCACTAAAGCACCGTCC
WO 1998045431-A/16: Cancer metastasis-associated gene.
HV447455.1:1-25
1ATTAACCCTCACTAAAGCACCGTCC
EST00001 Tripsacum dactyloides caryopsis Differential Display Tripsacum dactyloides cDNA clone ApoU1 5' similar to streptobrevin, mRNA sequence.
CB252003.1:1-25
1ATTAACCCTCACTAAAGCACCGTCCGCAACCTGTAACATCTAGATGTTTCGTGTG
46 Differentially expressed Dermacentor variabilis cDNA fragments Dermacentor variabilis cDNA clone Ou1011, mRNA sequence.
CB275496.1:1-25
1ATTAACCCTCACTAAAGCACCGTCCCGGGTCGGCGGTTCATTCAGGACTTCTTTT
47 Differentially expressed Dermacentor variabilis cDNA fragments Dermacentor variabilis cDNA clone Oi1011, mRNA sequence.
CB275497.1:1-25
1ATTAACCCTCACTAAAGCACCGTCCTCTCTGATACCACACGTACACAATCTTGCA
48 Differentially expressed Dermacentor variabilis cDNA fragments Dermacentor variabilis cDNA clone Oi1012, mRNA sequence.
CB275498.1:1-25
1ATTAACCCTCACTAAAGCACCGTCCCGTAGATGTGACCATGGGCTAGTGTACCAT
49 Differentially expressed Dermacentor variabilis cDNA fragments Dermacentor variabilis cDNA clone Oi1013 similar to Tubulin alpha chain, mRNA sequence.
CB275499.1:1-25
1ATTAACCCTCACTAAAGCACCGTCCAGTTTGTGGACTGGTGTCCCACAGGATTCA
50 Differentially expressed Dermacentor variabilis cDNA fragments Dermacentor variabilis cDNA clone Oi1014 similar to Mucin 2 precursor (Intestinal mucin 2) [R norvegicus], mRNA sequence.
CB275500.1:1-25
1ATTAACCCTCACTAAAGCACCGTCCAAACTCAACCGCAAGAAACGAGAACGTATC
51 Differentially expressed Dermacentor variabilis cDNA fragments Dermacentor variabilis cDNA clone Oi1015 similar to Tubulin alpha chain, mRNA sequence.
CB275501.1:1-25
1ATTAACCCTCACTAAAGCACCGTCCAGTTTGTGGACTGGTGTCCCACAGGATTCA
53 Differentially expressed Dermacentor variabilis cDNA fragments Dermacentor variabilis cDNA clone Oi1017, mRNA sequence.
CB275503.1:1-25
1ATTAACCCTCACTAAAGCACCGTCCACACCACATTTCAAAAGAAATTCTTTAAGT
54 Differentially expressed Dermacentor variabilis cDNA fragments Dermacentor variabilis cDNA clone Oi1019, mRNA sequence.
CB275504.1:1-25
1ATTAACCCTCACTAAAGCACCGTCCAGCGGCATGCCAAAATAAGGGGATACTGAT
54-54 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605659.1:4-28
ATT4ATTAACCCTCACTAAAGCACCGTCCTGCTTCATTTGCCACAGGACATGCCTCTGC
TaDDYr1-74 Triticum aestivum AvocetYr1 inoculated with Yellow Rust (race:PST45) Triticum aestivum cDNA, mRNA sequence.
FE900132.1:43-67
AGCTCGGTACCTCGCGAATGCATCTAGATT43ATTAACCCTCACTAAAGCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTG
TaDDYr10-73 Triticum aestivum AvocetYr10 inoculated with Yellow Rust (race:PST17) Triticum aestivum cDNA, mRNA sequence.
FE900140.1:1-25
1ATTAACCCTCACTAAAGCACCGTCCGTAAACCCCCCTCTCTCTCTGCTAGCTAGG
Gp-DD3_B81 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905343.1:87-111
CCGTCCTTAGACGCACACTTGTCACCAGAT87ATTAACCCTCACTAAAGCACCGTCCAGACGCACACTTGTCACCAGATATTAACCC
Gp-DD3_B81 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905343.1:181-205
ACCGTCCTAGACGCACACTTGTCACCAGAT181ATTAACCCTCACTAAAGCACCGTCCAGACGCACACTTGTCACCAGATATTAACCC
Gp-DD3_B81 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905343.1:228-252
CACCGTCCAGACGCACACTTGTCACCAGAT228ATTAACCCTCACTAAAGCACCGTCCAGACGCACACTTGTCACCAGATATTAACCC
Gp-DD3_B81 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905343.1:275-299
CACCGTCCAGACGCACACTTGTCACCAGAT275ATTAACCCTCACTAAAGCACCGTCCTTAGACGCACACTTGTCACCA
Gp-DD3_B28 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905345.1:25-49
AAAGATATCACTCAGCATAATGAT25ATTAACCCTCACTAAAGCACCGTCCCAAAAAAAAAGATATCACTCAGCATAATGA
Gp-DD3_B28 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905345.1:82-106
AAAAAAAAGATATCACTCAGCATAATGAGT82ATTAACCCTCACTAAAGCACCGTCCCAAAAAAAAAGATATCACTCAGCATAATGA
Gp-DD3_B28 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905345.1:138-162
AAAAAAAAAGATATCACTCAGCATAATGAT138ATTAACCCTCACTAAAGCACCGTCCCAAAAAAAAAGATATCACTCAGCATAATGA
Carica papaya ripening induced down-regulated cDNA clone DD-4 Induced ripening papaya pulp Carica papaya cDNA clone DD-4, mRNA sequence.
FK759817.1:1-25
1ATTAACCCTCACTAAAGCACCGTCCCCATTTCTCTGCAATACCTTGCAAAACAAA
Baha-cemb02 Differential display of roselle genotype, root Hibiscus sabdariffa cDNA clone P10T8-a 3', mRNA sequence.
JK757800.1:1-25
1ATTAACCCTCACTAAAGCACCGTCCATTCTGGTAGACTTAACTGCAGAATAAATA
Baha-cemb03 Differential display of roselle genotype, root Hibiscus sabdariffa cDNA clone P10T8-b 3', mRNA sequence.
JK757801.1:1-25
1ATTAACCCTCACTAAAGCACCGTCCGCGGATGTCTGAAGTATTAAGGATGCTAGA
Cocos nucifera partial mRNA for hypothetical protein (ORF1).
AM076491.1:1-25
1ATTAACCCTCACTAAAGCACCGTCCCACTATAGCGGCACTAGCATGAAGCCATCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGACGGTGCTTTAGTGAGGGTTAAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGACGGTGCTTTAGTGAGGGTTAAT | format : html | download : | debug : 

0.011 | 0.011 | search_start;
1.143 | 1.133 | search_plus_done; http://172.18.8.135:50400/match?q=GGACGGTGCTTTAGTGAGGGTTAAT&k=0&no_gap=0&offset=0&limit=50
2.318 | 1.174 | search_minus_done; http://172.18.8.135:50400/match?q=ATTAACCCTCACTAAAGCACCGTCC&k=0&no_gap=0&offset=0&limit=34
2.345 | 0.028 | cgi_end;

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