GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Acomys russatus genome assembly, chromosome: 22.
LR877233.1:10129489-10129506

ACAGGCTATCACAGAGACCACGGGTCCTTG10129489GGACTCAACACAACACAACAGCAGTTTCCAATTAAAAGACTACATCCC

Onychomys leucogaster genome assembly, chromosome: 18.
OX460388.1:63058241-63058258

ATGCCACAGTGAACAGGGAAAAGCCCTGGA63058241GGACTCAACACAACACAAAGAACTAAAGTCAACTAAGGGATGCTTTTG

Onychomys leucogaster genome assembly, chromosome: 18.
OX460435.1:58006900-58006917

ATGCCACAGTGGACAGGGAAAAGCCCTGGA58006900GGACTCAACACAACACAAAGAACTAAAGTCAACGAAGGGATGCTTTTG

Chionomys nivalis genome assembly, chromosome: 24.
OX465472.1:30561671-30561688

AAACCAATGGACACTGCAAGAAACCCATGA30561671GGACTCAACACAACACAAAATAATAGAGGCAACTGAGTAAATCTGGTG

Epinephelus fuscoguttatus DNA, LG14, complete sequence.
AP022688.1:25155876-25155893

ATATTGATCGGCTTCCTGTAACATTCAGTG25155876GGACTCAACACAACACAACATGGTGCATATCAGCTGATAGCAAAAATC

Gadus macrocephalus isolate Gmac_GOA_2020 chromosome 21.
CP133545.1:8288925-8288942

GTTCCAGAGTCTGGCCTCCCAGACCTCGAG8288925GGACTCAACACAACACAACGGGGAGAGCCTTTAAACAACCCGCGGAAA

Mastacembelus armatus genome assembly, chromosome: 4.
LR535836.1:11965071-11965088

TTATTAATGTCAATGTAGTAAAAACAGGCA11965071GGACTCAACACAACACAACTCAGACTCAGAAGGTGTTATTAAACAGTT

Thalassophryne amazonica genome assembly, chromosome: 10.
LR722975.1:86333667-86333684

CCAAAACCCTCAGGGCCACAAGCAGGAGCA86333667GGACTCAACACAACACAAGGTTTGTGCATTTTTCATGTTTCGAAAGCA

Scyliorhinus canicula genome assembly, chromosome: 7.
LR744036.1:54778878-54778895

TTGATATATAGCCAATTCTGTACAGGTGGT54778878GGACTCAACACAACACAAAACCTTAAGTTACTGCAAGTACAACAGATT

Coregonus sp. 'balchen' genome assembly, chromosome: 16.
LR778268.1:2249801-2249818

TTAAATGAGGCAGACACACGCCACAGTCAG2249801GGACTCAACACAACACAAAGCCTGGACAGTATGGACACAGTGAAGTAA

Electrona antarctica genome assembly, chromosome: 4.
OX578249.1:31107144-31107161

GTTACTACTGCTTCCCATTGCCAATGATAA31107144GGACTCAACACAACACAACAGCTTTGCTTGCTTGCCTGGAGATGTTTT

Rutilus rutilus genome assembly, chromosome: 15.
OX637947.1:32109294-32109311

AACAATTATCTTCTTAAATTAAAGGCAATT32109294GGACTCAACACAACACAATCTTTACAACTTAGCAAAGAACCAGTGGTC

Lipophrys pholis genome assembly, chromosome: 5.
OY726537.1:23496648-23496665

ATTTTTCTTCACAAGATTCTTAAGAGTAGT23496648GGACTCAACACAACACAACACAACTCAACAGAAGACCAGACAACCCTG

Gymnoscopelus microlampas genome assembly, chromosome: 10.
OY732712.1:27813252-27813269

ATAACGAGGGAGAATGGTATAGACCCCTGG27813252GGACTCAACACAACACAACACAACACACACACACACACACACACACAC

Sardina pilchardus genome assembly, chromosome: 10.
OY974095.1:27174937-27174954

CACACACACACACATACACACACACTTTTA27174937GGACTCAACACAACACAATGCAACTCTTAAATCCTACCCAGGTGTACA

Sardina pilchardus genome assembly, chromosome: 24.
OY974109.1:7065087-7065104

TGAGGAGCTATCTTTACCTCTCTCTGACCT7065087GGACTCAACACAACACAAACAATCTTACGCTGGGCCAAACAATTTTAC

Protomyctophum bolini genome assembly, chromosome: 6.
OZ001271.1:19229826-19229843

TGGCCATGTTTGACAGCCTCAGCAGCTCAC19229826GGACTCAACACAACACAAAAAATAAAAAAAACTCAAATCCAAAAAAAA

Oryza glaberrima clone OG_BBa0076E03, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces.
AC213140.2:30952-30969

CCAAAAACACCAACCGATTTGACACCATCC30952GGACTCAACACAACACAACAGTTATTACAGTATACACAGCATACATAC

Oryza glaberrima clone OG_BBa0060C01, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC213813.1:38275-38292

CCAAAAACACCAACCGATTTGACACCATCC38275GGACTCAACACAACACAACAGTTATTACAGTATACACAGCATACATAC

Arachis hypogaea cultivar Shitouqi chromosome A08.
CP030990.1:26999766-26999783

TGAGTGGAAGCCTTTGAGGGAAAAAGAGAG26999766GGACTCAACACAACACAACACAAAACACCACACCCTAGCCTATTATTA

Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:2972645-2972662

TGAGTGGAAGCCTTTGAGGGAAAAAGAGAG2972645GGACTCAACACAACACAACACAAAACACCACACCCTAGCCTATTATTA

Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:2775801-2775818

TGAGTGGAAGCCTTTGAGGGAAAAAGAGAG2775801GGACTCAACACAACACAACACAAAACACCACACCCTAGCCTATTATTA

UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 3.
CP125975.1:24879239-24879256

GAGAAACAAAAATAAAGATCGTTCGTTTGG24879239GGACTCAACACAACACAACCCAAAAAAGCAAAATAAAAAAAATGACGG

Brassica napus genome assembly, chromosome: C09.
HG994373.1:15154795-15154812

ATATGATTGATATACATCTTCAGAGCACAC15154795GGACTCAACACAACACAACTCTCCACATCCCCTCGACTATAAATATCT

Allium cepa genome assembly, chromosome: 3.
LR994631.1:217167278-217167295

TTTTAGGGACAAGTGTAAGGTCAAGCCCGA217167278GGACTCAACACAACACAAGCAGGCATAAGGTCAAGCCAAAGCAGGCTC

Fagus sylvatica genome assembly, chromosome: 3.
OU015763.1:31493397-31493414

ATTTAAAATAAAATATAAAAAGATACAATA31493397GGACTCAACACAACACAAAATAAGCTTTTTGTGAAAGTGTTGTGAGAT

Luzula sylvatica genome assembly, chromosome: 4.
OX326959.1:43576888-43576905

ATTGCACTATATAAACCAACGAACTTAAGA43576888GGACTCAACACAACACAACACTACACATTATTCAACAATGGCTTCCTC

Scutellaria minor genome assembly, chromosome: 7.
OX940731.1:8851506-8851523

ATGGGATTATGTGCAGAAGCAATCAACCAT8851506GGACTCAACACAACACAACAATAGAAGACAAGGGATTCGAATTTGTTA

Lathyrus sativus genome assembly, chromosome: 3.
OZ012737.1:497582277-497582294

GCAAAGATTTTATTTAAATGAGTATAAAAG497582277GGACTCAACACAACACAAGTGTAATTTAGAATCCTACAATGACATTGG

Lathyrus aphaca genome assembly, chromosome: 5.
OZ014523.1:449655033-449655050

CCCATCCAGTTGTGATAAGTGGACCAAAAG449655033GGACTCAACACAACACAAACACAAGCCTGAAACAGCCCCCAAGCCATA

Nesidiocoris tenuis Japan DNA, chromosome 1, sequence.
AP028909.1:9675794-9675811

TTTTCAACAGATTGTTCTATTTATCGACGG9675794GGACTCAACACAACACAACACAACACAACACAACACAACACAACACAA

Nesidiocoris tenuis Japan DNA, chromosome 1, sequence.
AP028909.1:9678725-9678742

TTTTCAACAGATTGTTCTTTTTATCGACGG9678725GGACTCAACACAACACAACACAACACAACACAACACAACACAACACAA

Grapholita molesta isolate lab01 chromosome gm10.
CP053129.1:10490708-10490725

ACGACTTCAAACACACGAGTGGCGTTAAAA10490708GGACTCAACACAACACAATACTTTTTAACGTGTGGTCTAAGGGTGCAC

Brachyptera putata genome assembly, chromosome: 6.
OU015467.1:23068303-23068320

AACCGCAATTTCGAAATTTTCAAGTTGAAC23068303GGACTCAACACAACACAATTTCAAACTCACTGAATGTAAATGTTATTC

Lineus longissimus genome assembly, chromosome: 3.
OU342994.1:20226342-20226359

GTACTCAACATGACAGTAAAGCATCTAAGT20226342GGACTCAACACAACACAACTGGAAATAGATAGGACATCATATCTAAAG

Pyrgus malvae genome assembly, chromosome: 22.
OU426968.1:3285868-3285885

TGAAAATCATTTTTGTATGATTTACACGAG3285868GGACTCAACACAACACAACGGATCCTTTGTAGTTAATCAGAAACCAGC

Chrysotoxum bicinctum genome assembly, chromosome: 3.
OU426989.1:61163216-61163233

AATGCGAATGAGGCTTTCATCAGCAAGCAA61163216GGACTCAACACAACACAACACAACGCAACACAAACATCTAAGGACATT

Pammene fasciana genome assembly, chromosome: 12.
OU452284.1:11274655-11274672

ACGACTTCAAACACACGAGTGGCGTTAAAA11274655GGACTCAACACAACACAATACTTTTTAACGTGTGGTCTAAGGCGCAGA

Selenia dentaria genome assembly, chromosome: 15.
OU862890.1:10038269-10038286

AAGATAATTGTTTTTAAATGTCAAATATCT10038269GGACTCAACACAACACAACAGTACTGAAGTCCGAAGTGACACAGTCAG

Epinotia nisella genome assembly, chromosome: 10.
OW028683.1:14056400-14056417

ACGACTCCAAACACACGAGTGGCGTTAAAA14056400GGACTCAACACAACACAATACTTTTTAACGTGTGGTCTAAGGGCACAC

Rutpela maculata genome assembly, chromosome: 3.
OW386287.2:35667316-35667333

GATGATGAGCATTAATTCGGTTTCAAGAAA35667316GGACTCAACACAACACAACAGATTGTTAGGATAGTTAACGATGTCAAG

Epinotia demarniana genome assembly, chromosome: 13.
OX244272.1:17273195-17273212

ACGACTCCAAACACGCGAGTGGCGTTAAAA17273195GGACTCAACACAACACAATACTTTTTAACGTGTGGTCTAAGGATACAA

Melanchra persicariae genome assembly, chromosome: 5.
OX376648.1:12743977-12743994

GTCGATAACAATTAAGGCTTAATCAATTTT12743977GGACTCAACACAACACAACAAGTTTTGAACATACACATCCAATGGACG

Epinotia ramella genome assembly, chromosome: 12.
OX388212.1:18453063-18453080

ACGACTTCAAACACGCGAGTGGCGTTAAAA18453063GGACTCAACACAACACAATAATAACGTGTGGTCTAAGAGCACAAACTT

Epinotia ramella genome assembly, chromosome: 12.
OX388212.1:18462808-18462825

ACGACTTCAAACACGCGAGTGGCGTTAAAA18462808GGACTCAACACAACACAATAATAACGTGTGGTCTAAGAGCACAAACTT

Lathronympha strigana genome assembly, chromosome: 10.
OX421911.1:12572090-12572107

ACGACTTCAAACACACGAGTGGCGTTAAAA12572090GGACTCAACACAACACAATACTTTTTAACGTATGGTCTAAGGTGCAGA

Agrotis exclamationis genome assembly, chromosome: 2.
OX465418.1:21149654-21149671

ATGTTGACCTAAATAAATGTATCTGTGGCT21149654GGACTCAACACAACACAACCACATGTTCAACGCTGGCCATATGAACAA

Sphenella marginata genome assembly, chromosome: 4.
OX608081.1:62738006-62738023

TCCATGCTTAGTTTTAAGCTGGAATCTCTT62738006GGACTCAACACAACACAAATTCTGTACTACCAACACACTTCACAGGTT

Ophion costatus genome assembly, chromosome: 10.
OX632365.1:9572218-9572235

CACGATAAAATTTTTTTTTTTAGCATCGCC9572218GGACTCAACACAACACAAAGCACTATTTTTGGCACTGTGCTTTTTTGG

Eucosma cana genome assembly, chromosome: 12.
OX637484.1:13076464-13076481

ACGACTTCAAACACGCGAGTGGCGTTAAAA13076464GGACTCAACACAACACAATACTTTTTAACGTGTGGTGTAAGGTCTGTG

Linnaemya tessellans genome assembly, chromosome: 5.
OX637536.1:59792233-59792250

TAAATTTGTGTATTTTCAATAATAATGTAA59792233GGACTCAACACAACACAATCACCGGCCAGCCAAATGCACACTGGCTAG

Hydrotaea cyrtoneurina genome assembly, chromosome: 3.
OY282514.1:42596716-42596733

ATCCACATCCGCATCCAAATGCCATGCATT42596716GGACTCAACACAACACAACTCGGCATTGGTATGTGGATGTAGGAATAA

Cheilosia grossa genome assembly, chromosome: 5.
OY720148.1:48542853-48542870

ATTAAAAGAGTTGAGTCCATATAACAACGA48542853GGACTCAACACAACACAAATTGAGATCAATTTCTGACAGCATTCGCAC

Ceriagrion tenellum genome assembly, chromosome: 5.
OY720636.1:109108204-109108221

GAAGGATGCCATTGGTGCCGCCTCGATGCG109108204GGACTCAACACAACACAAGAAGCGCACACACAGTGTTGTCGATATTTT

Stenodema calcarata genome assembly, chromosome: 13.
OY986060.1:8602245-8602262

CATGGTCAATTTAAGTTTCAATTTCAACAG8602245GGACTCAACACAACACAAAAACGCGGATACTTTTTAGCCAACAACAGC

Cepaea hortensis genome assembly, chromosome: 3.
OY992878.1:130641622-130641639

CAATATCCCGAGTGCTGTGATGTCGGTTCT130641622GGACTCAACACAACACAACTTAAATAAATACTCTTAAAATAAATAATA

Cepaea hortensis genome assembly, chromosome: 12.
OY992887.1:57533926-57533943

TAAATGTCCCGAGTGCTGTAAATCGGTTCT57533926GGACTCAACACAACACAACTCAACTCATGATACTCGTAACTGACGTGC

Chrysotoxum festivum genome assembly, chromosome: 3.
OZ007556.1:56897072-56897089

AATGCGAATGAGGCTTTCATCAGCAAGCAA56897072GGACTCAACACAACACAACGCAACACAAACATCTAAGGACATTCATTT

Dregea volubilis virus 4 isolate DvV4/YN, complete genome.
MZ813181.1:70-87

CAATTGCGAAGAATCTTAGGATTCTTAAGA70GGACTCAACACAACACAACCAAACACGATCAAGCACAAACTATCGACA

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Debug Info:

0.009 | 0.009 | search_start;
0.426 | 0.417 | search_plus_done; http://172.18.8.135:50400/match?q=GGACTCAACACAACACAA&k=0&no_gap=0&offset=0&limit=50
0.501 | 0.075 | search_minus_done; http://172.18.8.135:50400/match?q=TTGTGTTGTGTTGAGTCC&k=0&no_gap=0&offset=0&limit=0
0.501 | 0.000 | cgi_end;

Summary:

Results:

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