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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 11:36:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Bufo bufo genome assembly, chromosome: 1.
LR991667.1:128044891-128044910
CCTGTTTAACTGTCTACAAGACCCGGGTAC128044891GGACTCATTTCGTTCTTTTGAGCCTCTAGGAACTTATGTTATATTTGCAT
Bufo bufo genome assembly, chromosome: 1.
LR991667.1:438307790-438307809
CCTGTTTAACTGTCTACAAGACCCGGGTAT438307790GGACTCATTTCGTTCTTTTGAGCCTCCAGGAACTTATGTCATATTTGTAT
Bufo bufo genome assembly, chromosome: 1.
LR991667.1:438314145-438314164
CTTGTTTAACTGTCTACAAGACCCGGGTAC438314145GGACTCATTTCGTTCTTTTGAGCCTCCAGGAACTTATGTCATATTTGTAT
Bufo bufo genome assembly, chromosome: 4.
LR991670.1:142510757-142510776
AACCCCTGTTTAACTACAAGACCCGGGTAC142510757GGACTCATTTCGTTCTTTTGAGCCTCCAGGAACCTATGTCATATTTGTAT
Bufo bufo genome assembly, chromosome: 4.
LR991670.1:142607666-142607685
CCTGTTTAACTGTCTACGAGACCCGGGTAC142607666GGACTCATTTCGTTCTTTTGAGCCTCCAGGAACTTATGTCATATTTGTAT
Bufo bufo genome assembly, chromosome: 4.
LR991670.1:632090387-632090406
CCTGTTTAACTGTCTACAAGACCTGGGTAT632090387GGACTCATTTCGTTCTTTTGAGCCTCCAGGAACTTATGTTATATTTGTAT
Bufo bufo genome assembly, chromosome: 6.
LR991672.1:142379963-142379982
CCTGTTCCACTGTCTACAAGACCCGGGTAC142379963GGACTCATTTCGTTCTTTTGAGCCCCCAGGAACTTATGTTATATTTGTAT
Bufo bufo genome assembly, chromosome: 6.
LR991672.1:152384916-152384935
CCTGTTTAACTGTCTACAAGACCCGGGTAC152384916GGACTCATTTCGTTCTTTTGAGCCTCCAGGAACTTATGTTATATTGGTAT
Bufo bufo genome assembly, chromosome: 7.
LR991673.1:165057977-165057996
CCTGTTTAACTGTCTACAAGACCCGGGTAC165057977GGACTCATTTCGTTCTTTTGAGCCTCCAGGAACTTATGTCATATTTGTAT
Bufo bufo genome assembly, chromosome: 2.
LR991668.1:787172265-787172284
ATACAAATATGACATAAGTTCCTGGAGGAT787172265CAAAAGAACGAAATGAGTCCGTACCCGGGTCTTGTAGACAGTTAAACAGG
Bufo bufo genome assembly, chromosome: 5.
LR991671.1:552121902-552121921
ATACAAATATGACATAAGTTCCTGGAGGCT552121902CAAAAGAACGAAATGAGTCCGTACCCGGGTCTTGTAGACAGTTAATCAGG
Bufo bufo genome assembly, chromosome: 6.
LR991672.1:177570393-177570412
ATACAAATATGACATAAGTTCCTGGAGGCT177570393CAAAAGAACGAAATGAGTCCGTACCCGGGTCTTGTAGACAGTTAAAAGGG
Bufo bufo genome assembly, chromosome: 6.
LR991672.1:423400313-423400332
ATACAAATATGACATAAGTTCCTGGAGGCT423400313CAAAAGAACGAAATGAGTCCAAACCCGGGTCTTGTAGACAGTTAAACAGG
Bufo bufo genome assembly, chromosome: 7.
LR991673.1:204270075-204270094
ATACAAATATGACATAAGTTCCTGGAGGCT204270075CAAAAGAACGAAATGAGTCCATACCCGGGTCTTGTAGACAGTTAAACAGG
Bufo bufo genome assembly, chromosome: 11.
LR991677.1:74026884-74026903
ATACAAATATGACATAAGTTCCTGGAGGCT74026884CAAAAGAACGAAATGAGTCCGTACCCCGGTCTTGTAGACAGTTAAACAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGACTCATTTCGTTCTTTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGACTCATTTCGTTCTTTTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.197 | 0.188 | search_plus_done; http://172.18.8.135:50400/match?q=GGACTCATTTCGTTCTTTTG&k=0&no_gap=0&offset=0&limit=50
0.316 | 0.119 | search_minus_done; http://172.18.8.135:50400/match?q=CAAAAGAACGAAATGAGTCC&k=0&no_gap=0&offset=0&limit=41
0.320 | 0.004 | cgi_end;

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