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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 04:23:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Bos mutus isolate yakQH1 chromosome X.
CP027098.1:121618031-121618050
TAAATGGGGAGTCACATAAAAATTGTTGAA121618031GGAGAAAATTTTGAACCGCATCAAAAATTATAGGGAATTTTGAACACTTG
Bos taurus genome assembly, chromosome: X.
LR962768.1:137961872-137961891
TAAATGGGGAGTCACATAAAAATTGTTGAA137961872GGAGAAAATTTTGAACCGCATCAAAAATTATAGGGAATTTTGAACACTTG
Bos gaurus x Bos taurus genome assembly, chromosome: X.
OX258984.1:134707899-134707918
TAAATGGGGAGTCACATAAAAATTGTTGAA134707899GGAGAAAATTTTGAACCGCATCAAAAATTATAGGGAATTTTGAACACTTG
Bos taurus strain mammals genome assembly, chromosome: X.
OX344689.1:152583826-152583845
TAAATGGGGAGTCACATAAAAATTGTTGAA152583826GGAGAAAATTTTGAACCGCATCAAAAATTATAGGGAATTTTGAACACTTG
Bos taurus genome assembly, chromosome: BtaX.
OY997258.1:142589814-142589833
TAAATGGGGAGTCACATAAAAATTGTTGAA142589814GGAGAAAATTTTGAACCGCATCAAAAATTATAGGGAATTTTGAACACTTG
Bos taurus clone CH240-512G22, WORKING DRAFT SEQUENCE, 18 unordered pieces.
AC230321.1:99367-99386
TAAATGGGGAGTCACATAAAAATTGTTGAA99367GGAGAAAATTTTGAACCGCATCAAAAATTATAGGGAATTTTGAACACTTG
Culex pipiens genome assembly, chromosome: 3.
OZ004313.1:63545427-63545446
TTGTCTCCCGCCGAACAGTTGAACTAATTT63545427GGAGAAAATTTTGAACCGCACAAACACGCACTAAGGACGACCGGTTTAAT
Rangifer tarandus platyrhyncus genome assembly, chromosome: X.
OX460343.1:21782657-21782676
CAAGTGTTCAAAATTCCCTATACTTTTTGA21782657TGCGGTTCAAAATTTTCTCCTTCAACAATTTTTATGTGACTCCCCATTTA
Muntiacus reevesi genome assembly, chromosome: X.
OZ005628.1:19441715-19441734
CAAGTGTTCAAAATTCCCTATAATTTTTGA19441715TGCGGTTCAAAATTTTCTCCTTCAACAATTTTTATGTGACTCCCCATTTA
Sequence 64886 from patent US 7468248.
GP131329.1:133-152
AAGTGTTCAAAATTCCCCTATAATTTTTGA133TGCGGTTCAAAATTTTCTCCTTCAACAATTTTTATGTGACTCCCCCATTT
Sequence 64886 from patent US 7511127.
GP418154.1:133-152
AAGTGTTCAAAATTCCCCTATAATTTTTGA133TGCGGTTCAAAATTTTCTCCTTCAACAATTTTTATGTGACTCCCCCATTT
Sequence 64886 from patent US 7709206.
GX252031.1:133-152
AAGTGTTCAAAATTCCCCTATAATTTTTGA133TGCGGTTCAAAATTTTCTCCTTCAACAATTTTTATGTGACTCCCCCATTT
Sequence 64886 from patent US 8026064.
GY438061.1:133-152
AAGTGTTCAAAATTCCCCTATAATTTTTGA133TGCGGTTCAAAATTTTCTCCTTCAACAATTTTTATGTGACTCCCCCATTT
Sequence 64886 from Patent WO2009089296.
HB559244.1:134-153
AAGTGTTCAAAATTCCCCTATAATTTTTGA134TGCGGTTCAAAATTTTCTCCTTCAACAATTTTTATGTGACTCCCCCATTT
Sequence 64886 from patent US 8450064.
HJ176608.1:133-152
AAGTGTTCAAAATTCCCCTATAATTTTTGA133TGCGGTTCAAAATTTTCTCCTTCAACAATTTTTATGTGACTCCCCCATTT
Sequence 64886 from patent US 8669056.
HJ795302.1:133-152
AAGTGTTCAAAATTCCCCTATAATTTTTGA133TGCGGTTCAAAATTTTCTCCTTCAACAATTTTTATGTGACTCCCCCATTT
Sequence 64886 from patent US 9206478.
HL444899.1:133-152
AAGTGTTCAAAATTCCCCTATAATTTTTGA133TGCGGTTCAAAATTTTCTCCTTCAACAATTTTTATGTGACTCCCCCATTT
Sequence 64886 from patent US 9410202.
KH121554.1:133-152
AAGTGTTCAAAATTCCCCTATAATTTTTGA133TGCGGTTCAAAATTTTCTCCTTCAACAATTTTTATGTGACTCCCCCATTT
Sequence 64886 from patent US 9982311.
MI810077.1:133-152
AAGTGTTCAAAATTCCCCTATAATTTTTGA133TGCGGTTCAAAATTTTCTCCTTCAACAATTTTTATGTGACTCCCCCATTT
Sequence 64886 from patent US 10190167.
MM676412.1:133-152
AAGTGTTCAAAATTCCCCTATAATTTTTGA133TGCGGTTCAAAATTTTCTCCTTCAACAATTTTTATGTGACTCCCCCATTT
Sequence 64886 from patent US 11053547.
MX992410.1:133-152
AAGTGTTCAAAATTCCCCTATAATTTTTGA133TGCGGTTCAAAATTTTCTCCTTCAACAATTTTTATGTGACTCCCCCATTT
sac28c07.y1 Gm-c1051 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1051-3566 5', mRNA sequence.
BG359762.1:142-161
AGAGAGAGAGAGAGAGAGAGAGAGAGAATG142TGCGGTTCAAAATTTTCTCCGCTCATGTTTTGTTTGTTTAAATAAAAATA
Bos taurus clone CH240-460D17, WORKING DRAFT SEQUENCE, 9 unordered pieces.
AC223724.1:66945-66964
CAAGTGTTCAAAATTCCCTATAATTTTTGA66945TGCGGTTCAAAATTTTCTCCTTCAACAATTTTTATGTGACTCCCCATTTA
Glycine max cultivar Williams 82 chromosome 13.
CP126438.1:13712476-13712495
AGAGAGAGAGAGAGAGAGAGAGAGAGAATG13712476TGCGGTTCAAAATTTTCTCCGCTCATGTTTTGTTTGTTTAAATAAAAATA
Avena eriantha genome assembly, chromosome: 6C.
OU342745.1:449596454-449596473
GGGCCAGACTGAGGGGCGCTTTAAAACTCG449596454TGCGGTTCAAAATTTTCTCCATGCATGCGGAACCAAACGCCCTTATTTCT
Microplitis manilae isolate GZ chromosome 6.
CP092725.1:20455582-20455601
AATGTGAATTGTCTTCGTCGTCCTCAGCCT20455582TGCGGTTCAAAATTTTCTCCGTCTCGTTGCCGCCTAAATTCAGTACGTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGAGAAAATTTTGAACCGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAGAAAATTTTGAACCGCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
1.717 | 1.708 | search_plus_done; http://172.18.8.135:50400/match?q=GGAGAAAATTTTGAACCGCA&k=0&no_gap=0&offset=0&limit=50
3.760 | 2.043 | search_minus_done; http://172.18.8.135:50400/match?q=TGCGGTTCAAAATTTTCTCC&k=0&no_gap=0&offset=0&limit=43
3.772 | 0.012 | cgi_end;

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