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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-16 00:57:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Erpetoichthys calabaricus genome assembly, chromosome: 3.
LR536434.2:89756777-89756796
AGGCATCTTCTTTGAAAATGTCAAGTAGAA89756777GGAGGACAAGAGTGGAGCTGCAGGTAGTTTGTACAGAACAGAGGACAAAA
RG4_C11 Cucumber leaf Cucumis sativus cDNA, mRNA sequence.
CK085525.1:643-662
CGAGGAAGGACCTGAGCCCAGCCCTTCACT643GGAGGACAAGAGTGGAGCTGAAGCATTAATGAAGGTTGCCGGAAGT
RG5_D07 Cucumber leaf Cucumis sativus cDNA, mRNA sequence.
CK085591.1:44-63
CGAGGAAGGTCCTGCGCCCAGCCCTTCACT44GGAGGACAAGAGTGGAGCTGAAGCATTAATGAAGGTTGCCGGAAGTTTGG
csa02-1ms4-c03 Csa02 Cucumis sativus cDNA clone csa02-1ms4-c03 5', mRNA sequence.
CK759621.1:185-204
GAGGAAGGTCACTGCGCCCAGCCCTTCACT185GGAGGACAAGAGTGGAGCTGAAGCATTAATGAAGGTTGCCGGAAGCTTGG
csa01-1ms3-a12 Csa01 Cucumis sativus cDNA clone csa01-1ms3-a12 5', mRNA sequence.
CO995334.1:250-269
CGAGGAAGGTCCTGCGCCCAGCCCTTCACT250GGAGGACAAGAGTGGAGCTGAAGCATTAATGAAGGTTGCCGGAAGTTTGG
csa01-3ms1-h03 Csa01 Cucumis sativus cDNA clone csa01-3ms1-h03 5', mRNA sequence.
CO998468.1:88-107
CGAGGAAGGTCCTGCGCCCAGCCCTTCACT88GGAGGACAAGAGTGGAGCTGAAGCATTAATGAAGGTTGCCGGAAGTTTGG
Cucumis sativus mRNA for arabinogalactan protein, complete cds.
AB029092.2:662-681
CGAGGAAGGTCCTGCGCCCAGCCCTTCACT662GGAGGACAAGAGTGGAGCTGAAGCATTAATGAAGGTTGCCGGAAGTTTGG
Cucumis sativus mRNA expressed in cucumber hypocotyls, complete cds.
AB029147.1:662-681
CGAGGAAGGTCCTGCGCCCAGCCCTTCACT662GGAGGACAAGAGTGGAGCTGAAGCATTAATGAAGGTTGCCGGAAGTTTGG
Cepaea hortensis genome assembly, chromosome: 10.
OY992885.1:18587365-18587384
GAGAAGTAGAGATAGACATGAATAACATGG18587365GGAGGACAAGAGTGGAGCTGCATGGGATAACTCAGGATAGAAAGATTTCA
Cepaea hortensis genome assembly, chromosome: 17.
OY992892.1:6162984-6163003
AAGAGAATTTGAGACTGATGAATCATATGG6162984GGAGGACAAGAGTGGAGCTGAGTGTGCTTTCACAAACCACATCTCCGCAA
Cuc3_3_F02 Cucumber fruit development cDNA library Cucumis sativus cDNA, mRNA sequence.
DN910045.1:382-401
CCAAACTTCCGGCAACCTTCATTAATGCTT382CAGCTCCACTCTTGTCCTCCAGTGAAGGGCTGGGCGCAGGACCTTCCTCG
Cuc5_1_D09 Cucumber fruit development cDNA library Cucumis sativus cDNA, mRNA sequence.
DN910632.1:411-430
CCAAACTTCCGGCAACCTTCATTAATGCTT411CAGCTCCACTCTTGTCCTCCAGTGAAGGGCTGGGCGCAGGACCTTCCTCG
TSA: Cucumis sativus var. sativus cultivar Vlaspik CuSa200910_3038, mRNA sequence.
JW921207.1:430-449
CCAAACTTCCGGCAACCTTCATTAATGCTT430CAGCTCCACTCTTGTCCTCCAGTGAAGGGCTGGGCGCAGGACCTTCCTCG
Hibiscus tridactylites genome assembly, chromosome: 18.
OY288282.1:85162456-85162475
CAAAGACCGGGCCAGGGGTTGAGTGGCAGG85162456CAGCTCCACTCTTGTCCTCCATTTCCCTCATTTTTTCACTGTTCCTTAGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGAGGACAAGAGTGGAGCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAGGACAAGAGTGGAGCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.485 | 0.476 | search_plus_done; http://172.18.8.135:50400/match?q=GGAGGACAAGAGTGGAGCTG&k=0&no_gap=0&offset=0&limit=50
0.677 | 0.192 | search_minus_done; http://172.18.8.135:50400/match?q=CAGCTCCACTCTTGTCCTCC&k=0&no_gap=0&offset=0&limit=40
0.680 | 0.003 | cgi_end;

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