GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 13:51:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arabidopsis thaliana cDNA clone:RAFL08-09-K22, 3'-end.
AV793670.1:221-240
TAGAGATAGAGTTGGTCTTGAACAGTTGCT221GGAGGACTTGAGGATGAGGATGTCCAAGGCGTCTGTGCCACACTTCATCA
Cepaea hortensis genome assembly, chromosome: 18.
OY992893.1:79010725-79010744
GAGGAAGAGTTGAGGAAGGGGAGTTGAGGA79010725GGAGGACTTGAGGATGAGGACTTGAGGAGGAGGAGGAGTTGAGGAGGAGG
Ziziphus jujuba cultivar Dongzao chromosome 8.
CP134458.1:2721674-2721693
TTTCTGAAAACTCCTTGACCCTTTCTTTCT2721674TCCTCATCCTCAAGTCCTCCAAAAAAGGTTTAATGGCAGATATTTGGTCC
Viola odorata genome assembly, chromosome: 6.
OY829542.1:57122174-57122193
CTTTGCCTCCTCCTGTTCCGCTCCGCTCCC57122174TCCTCATCCTCAAGTCCTCCCTCAAAGACCCTCTCAACACTCTCCAAGAC
Viola odorata genome assembly, chromosome: 9.
OY829545.1:58160338-58160357
CTTCGCCTCTTCCTGTTCCCGTCCGCTCCC58160338TCCTCATCCTCAAGTCCTCCCTCAAAGACCCTTTCAACACTCTCCAAGGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGAGGACTTGAGGATGAGGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAGGACTTGAGGATGAGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.101 | 0.092 | search_plus_done; http://172.18.8.135:50400/match?q=GGAGGACTTGAGGATGAGGA&k=0&no_gap=0&offset=0&limit=50
0.117 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=TCCTCATCCTCAAGTCCTCC&k=0&no_gap=0&offset=0&limit=48
0.119 | 0.002 | cgi_end;

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