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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-03-24 06:43:55, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arvicola amphibius genome assembly, chromosome: 4.
LR862383.1:29278385-29278404
TCCTTCATGAATTGGGAAAGGGAATAGAAG29278385GGAGGGAATAGAGGTGGGAACATGAGGGCTTGAAATGACGAAGTTGTGGG
Sequence 72425 from patent US 9029636.
HK981488.1:184-203
CCGTCTTTGAAGTGCTTCTTCCACCGTCGT184GGAGGGAATAGAGGTGGGAATAGTGGAGGGAAAGGAGGGAAAATTGGTTT
UCRVU04_CCNI6458_g1 Cowpea 524B Mixed Tissue and Conditions cDNA Library UCRVU04-1-2 Vigna unguiculata cDNA clone CCNI6458.g1, mRNA sequence.
FG821372.1:469-488
GAAGCAGAAGGTGTGCCAGGACTGTGGGGT469GGAGGGAATAGAGGTGGGAATAGTGGAGGGAAAGGAGGAATAGGGAAAAT
UCRVU08_CCNS12310_g1 Cowpea IT97K-461-4 Mixed Tissue and Conditions cDNA Library UCRVU08-1-2 Vigna unguiculata cDNA clone CCNS12310.g1, mRNA sequence.
FG892489.1:121-140
GAAGCAGAAGGTGTGCCAGGACTGTGGGGT121GGAGGGAATAGAGGTGGGAATAGTGGAGGGAAAGGAGGAATAGGGAAAAT
UCRVU08_CCNS1298_g1 Cowpea IT97K-461-4 Mixed Tissue and Conditions cDNA Library UCRVU08-1-2 Vigna unguiculata cDNA clone CCNS1298.g1, mRNA sequence.
FG893798.1:121-140
GAAGCAGAAGGTGTGCCAGGACTGTGGGGT121GGAGGGAATAGAGGTGGGAATAGTGGAGGGAAAGGAGGAATAGGGAAAAT
454GmaGlobSeed140244 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK405612.1:30-49
GAAGCAGGGGTGTGCCAGGGCTATGAGGT30GGAGGGAATAGAGGTGGGAATAGTGGAGGGAAAGGAGGAAATTGGTTTGT
454GmaGlobSeed356942 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK622310.1:31-50
GAAGCAGGGGGTGTGCCAGGGCTATGAGGT31GGAGGGAATAGAGGTGGGAATAGTGGAGGGAAAGGAGGGAAATTGGTTTT
454GmaGlobSeed387717 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK653085.1:103-122
GAAGCAGGGGGTGTGCCAGGGCTATGAGGT103GGAGGGAATAGAGGTGGGAATAGTGGAGGGAAAGGAGGAAATTGGTTTTG
454PCS0122611 Scarlet Runner Bean globular-stage suspensor region Phaseolus coccineus cDNA, mRNA sequence.
GD494920.1:70-89
GAAGCAGGGGGTGTGCCAGGACTGTGAGGT70GGAGGGAATAGAGGTGGGAATAGTGGAGGGAAAGGAGGAAAAGGGAAGA
454GmaGlobSeed414607 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD671958.1:107-126
GAAGCAGGGGGTGTGCCAGGGCTATGAGGT107GGAGGGAATAGAGGTGGGAATAGTGGAGGGAAAGGAGGGAAAATTGGGTC
454GmaGlobSeed551601 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD808952.1:105-124
GAAGCAGGGGGTGTGCCAGGGCTATGAGGT105GGAGGGAATAGAGGTGGGAATAGTGGAGGGAAAGGAGGGAAAATTGGTTT
Vigna angularis mRNA, clone: VES05H24.
HX944155.1:340-359
GAAGAAGCAGGTGTGCCAGGACTGTGAGGT340GGAGGGAATAGAGGTGGGAACAGTGGAGGGAAAGGAGGAATAGGGAAAAT
GT_DBa084O02.R GT_DBa Glycine tomentella genomic 3', genomic survey sequence.
HN740433.1:769-788
GAAGCAGGGGGTGTGCCAGGGCTATGAGGT769GGAGGGAATAGAGGTGGGAATAGTGGAGGGAAAGGAGGGAAAATTGGTTT
Scutellaria galericulata genome assembly, chromosome: 1.
OX335784.1:20147127-20147146
ACTTCGGACCAACATTTGTGATTAGTCTGA20147127GGAGGGAATAGAGGTGGGAAATATCAGGTGTGGCATTAGCAAAAGACATT
Scutellaria galericulata genome assembly, chromosome: 1.
OX335784.1:20519462-20519481
AGGAACCGTCGAGGTTTTTGATTAGTCCGA20519462GGAGGGAATAGAGGTGGGAAATATCAGGCGTGGTATTAGCAAAAGACATT
Lochmaea crataegi genome assembly, chromosome: 4.
OX387426.1:30823436-30823455
AAGAGATGGGGACTGGGATGGTAAAAAGGG30823436GGAGGGAATAGAGGTGGGAAATCCAATGATAGGAGATGAAAAGGTGGAGG
Axinella damicornis genome assembly, chromosome: 5.
OZ007509.1:14319598-14319617
TATTTTGGAGTGGTACGGCCACTGCCGAAG14319598GGAGGGAATAGAGGTGGGAAGTGTCGATCTGTCCGCACAAAGCGCGGAAA
MOOEK69TF MOO Vigna unguiculata cDNA 5', mRNA sequence.
FF401320.1:379-398
CAAGTTAATAAACAGCAGTGAGCCCCACTA379TTCCCACCTCTATTCCCTCCACCCCACAGTCCTGGCACACCTTCTGCTTC
MOPDE70TF MOP Vigna unguiculata cDNA 5', mRNA sequence.
FF542562.1:134-153
ATTTTCCCTATTCCTCCTTTCCCTCCACTA134TTCCCACCTCTATTCCCTCCACCCCACAGTCCTGGCACACCTTCTGCTTC
MOPCX95TF MOP Vigna unguiculata cDNA 5', mRNA sequence.
FF546965.1:595-614
ATTTTCCCTATTCCTCCTTTCCCTCCACTA595TTCCCACCTCTATTCCCTCCACCCCACAGTCCTGGCACACCTTCTGCTTC
454PCS0020889 Scarlet Runner Bean globular-stage suspensor region Phaseolus coccineus cDNA, mRNA sequence.
GD393198.1:47-66
ATCTTCCCTTTTCCTCCTTTCCCTCCACTA47TTCCCACCTCTATTCCCTCCACCTCACAGT
454PCS0160637 Scarlet Runner Bean globular-stage suspensor region size-fractionated Phaseolus coccineus cDNA, mRNA sequence.
GD532946.1:25-44
CTTTTCCTTCCTTTCCCTCCACTA25TTCCCACCTCTATTCCCTCCACCTCACAGTCCTGGCACACCCCCTGCTTC
454PCS0222386 Scarlet Runner Bean globular-stage suspensor region size-fractionated Phaseolus coccineus cDNA, mRNA sequence.
GD594695.1:68-87
ATCTTCCCTTTTCCTCCTTTCCCTCCACTA68TTCCCACCTCTATTCCCTCCACCTCACAGTCCTGGCACACCCCCT
454PCS0249719 Scarlet Runner Bean globular-stage suspensor region size-fractionated Phaseolus coccineus cDNA, mRNA sequence.
GD622028.1:25-44
CTTTTCCTTCCTTTCCCTCCACTA25TTCCCACCTCTATTCCCTCCACCTCACAGTCCTGGCACACCCCCTGCTTC
454GmaGlobSeed811261 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GE068613.1:48-67
AAACCAATTTTCCCTCCTTTCCCTCCACTA48TTCCCACCTCTATTCCCTCCACCTCATAGCCCTGGCACACCCCCTGCTTC
Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
AP015044.1:7367553-7367572
ATTTTCCCTATTCCTCCTTTCCCTCCACTG7367553TTCCCACCTCTATTCCCTCCACCTCACAGTCCTGGCACACCTGCTTCTTC
Vigna unguiculata cultivar Xiabao 2 chromosome Vu04.
CP039349.1:31810474-31810493
ATTTTCCCTATTCCTCCTTTCCCTCCACTA31810474TTCCCACCTCTATTCCCTCCACCCCACAGTCCTGGCACACCTTCTGCTTC
Glycine max cultivar Williams 82 chromosome 19.
CP126444.1:4599018-4599037
AAACCAATTTTCCCTCCTTTCCCTCCACTA4599018TTCCCACCTCTATTCCCTCCACCTCATAGCCCTGGCACACCCCCTGCTTC
Lochmaea crataegi genome assembly, chromosome: 7.
OX387429.1:34791319-34791338
CCTTAACCTTTTCATTCCCTAATATTGGAT34791319TTCCCACCTCTATTCCCTCCCCCTTTTTACCATCCCAGTCCCTATCTCTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGAGGGAATAgAGGTGGGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAGGGAATAgAGGTGGGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.273 | 1.265 | search_plus_done; http://172.18.8.135:50400/match?q=GGAGGGAATAGAGGTGGGAA&k=0&no_gap=0&offset=0&limit=50
2.131 | 0.857 | search_minus_done; http://172.18.8.135:50400/match?q=TTCCCACCTCTATTCCCTCC&k=0&no_gap=0&offset=0&limit=33
2.139 | 0.008 | cgi_end;

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