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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 19:31:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-4705 Pericarp Coffea canephora cDNA clone cccp7f9 5', mRNA sequence.
DV666732.1:86-110
TACCGCTACCGCTAGACCCTGCAAAACCCT86CTTTTTTTACACCACCACCACCTCCTATTACCCCTCCACCACCACAACTGCCGCT
CGN-5021 Pericarp Coffea canephora cDNA clone cccp24j19 5', mRNA sequence.
DV666957.1:235-259
TACCGCTACCGCTAGACCCTGCAAAACCCT235CTTTTTTTACACCACCACCACCTCCTATTACCCCTCCACCACCACAACTGCCGCT
CGN-26932 Leaf Coffea canephora cDNA clone cccl6g9 5', mRNA sequence.
DV685568.1:197-221
TACCGCTACCGCTAGACCCTGCAAAACCCT197CTTTTTTTACACCACCACCACCTCCTATTACCCCTCCACCACCACAACTGCCGCT
CGN-27070 Leaf Coffea canephora cDNA clone cccl8p4 5', mRNA sequence.
DV685666.1:108-132
TACAGCTACCGCTAGACCCTGCAAAACCCT108CTTTTTTTACACCACCACCACCTCCTATTACCCCTCCACCACCACAACTGCCGCT
TransId-217039 CACATN1 Coffea arabica cDNA clone CACATN1-5B11TV similar to Hypothetical protein - Cicer arietinum (Chickpea) (Garbanzo), mRNA sequence.
GR998503.1:138-162
TACCGCTACCGCTAGACCCTGCAAAACCCT138CTTTTTTTACACCACCACCACCTCCTATTACCCCTCCACCACCACAACTGCCGCT
TransId-211606 CACATN1 Coffea arabica cDNA clone CACATN1-3L24TV similar to Hypothetical protein - Cicer arietinum (Chickpea) (Garbanzo), mRNA sequence.
GT000830.1:135-159
TACCGCTACCGCTAGACCCTGCAAAACCCT135CTTTTTTTACACCACCACCACCTCCTATTACCCCTCCACCACCACAACTGCCGCT
TransId-239419 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEYI16TV similar to Hypothetical protein - Cicer arietinum (Chickpea) (Garbanzo), mRNA sequence.
GT009019.1:140-164
TACCGCTACCGCTAGACCCTGCAAAACCCT140CTTTTTTTACACCACCACCACCTCCTATTACCCCTCCACCACCACAACTGCCGCT
TransId-257871 CAET87R Coffea arabica cDNA clone CAET87R-CAEUK43TV similar to Hypothetical protein - Cicer arietinum (Chickpea) (Garbanzo), mRNA sequence.
GT015544.1:131-155
TACCGCTACCGCTAGACCCTGCAAAACCCT131CTTTTTTTACACCACCACCACCTCCTATTACCCCTCCACCACCACAACTGCCGCT
TransId-278192 CarCatBudEnri2 Coffea arabica cDNA clone CarCatBudEnri2_47-E09-PAL17d similar to Hypothetical protein - Cicer arietinum (Chickpea) (Garbanzo), mRNA sequence.
GT019877.1:85-109
TACCGCTACCGCTAGACCCTGCAAAACCCT85CTTTTTTTACACCACCACCACCTCCTATTACCCCTCCACCACCACAACTGCCGCT
AFP0ABA33YJ09RM1 BAC end, cultivar HD200-94 of Coffea canephora, genomic survey sequence.
FO636438.1:650-674
TACCGCTACCGCTAGACCCTGCAAAACCCT650CTTTTTTTACACCACCACCACCTCCTATTACCCCTCCACCACCACAACTGCCGCT
CCES51 Coffee EST-SSR sequence Coffea canephora STS cDNA, sequence tagged site.
GF110698.1:235-259
TACCGCTACCGCTAGACCCTGCAAAACCCT235CTTTTTTTACACCACCACCACCTCCTATTACCCCTCCACCACCACAACTGCCGCT
Coffea arabica microsatellite DNA, clone 16-6CTG.
AJ308840.1:240-264
TACCGCTACCGCTAGACCCTGCAAAACCCT240CTTTTTTTACACCACCACCACCTCCTATTACCCCTCCACCACCACAACTGCCGCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGAGGTGGTGGTGGTGTAAAAAAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAGGTGGTGGTGGTGTAAAAAAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.355 | 0.347 | search_plus_done; http://172.18.8.135:50400/match?q=GGAGGTGGTGGTGGTGTAAAAAAAG&k=0&no_gap=0&offset=0&limit=50
1.769 | 1.413 | search_minus_done; http://172.18.8.135:50400/match?q=CTTTTTTTACACCACCACCACCTCC&k=0&no_gap=0&offset=0&limit=50
1.777 | 0.008 | cgi_end;

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