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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-04 12:25:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:25145870-25145889
CATGAGATGCTAGAGTTCAACGATTTCAGA25145870GGAGTTGGCCTTGACATTCGTCTTAAGGTGTGGAATGAATCCATCGCTCT
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:25630432-25630451
CATGAGATGCTAGAGTTCAACGATTTCAGA25630432GGAGTTGGCCTTGACATTCGTCTTAAGGTGTGGAATGAATCCATCGCTCT
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:25219362-25219381
CATGAGATGCTAGAGTTCAACGATTTCAGA25219362GGAGTTGGCCTTGACATTCGTCTTAAGGTGTGGAACGAATCCATCGCTCT
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:28131414-28131433
AGAGCGATGGATTCATTCCACACCTTAAGA28131414CGAATGTCAAGGCCAACTCCTCTGAAATCGTTGAACTCTAGCATCTCATG
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:27631201-27631220
AGAGCGATGGATTCATTCCACACCTTAAGA27631201CGAATGTCAAGGCCAACTCCTCTGAAATCGTTGAACTCTAGCATCTCATG
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:27904901-27904920
AGAGCGATGGATTCATTCCACACCTTAAGA27904901CGAATGTCAAGGCCAACTCCTCTGAAATCGTTGAACTCTAGCATCTCATG
Malus domestica genome assembly, chromosome: 10.
OU744551.1:27645463-27645482
AGAGCGATGGATTCATTCCACACCTTAAGA27645463CGAATGTCAAGGCCAACTCCTCTGAAATCGTTGAACTCTAGCATCTCATG
Malus domestica genome assembly, chromosome: 10.
OU744962.1:28591270-28591289
AGAGCGATGGATTCATTCCACACCTTAAGA28591270CGAATGTCAAGGCCAACTCCTCTGAAATCGTTGAACTCTAGCATCTCATG
Malus domestica genome assembly, chromosome: 10.
OU745000.1:27466409-27466428
AGAGCGATGGATTCATTCCACACCTTAAGA27466409CGAATGTCAAGGCCAACTCCTCTGAAATCGTTGAACTCTAGCATCTCATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGAGTTGGCCTTGACATTCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAGTTGGCCTTGACATTCG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.193 | 0.184 | search_plus_done; http://172.18.8.135:50400/match?q=GGAGTTGGCCTTGACATTCG&k=0&no_gap=0&offset=0&limit=50
0.292 | 0.098 | search_minus_done; http://172.18.8.135:50400/match?q=CGAATGTCAAGGCCAACTCC&k=0&no_gap=0&offset=0&limit=47
0.295 | 0.004 | cgi_end;

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