GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 00:25:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Musa acuminata subsp. malaccensis isolate AA chromosome 4.
CP126373.1:37424255-37424274
TGACAGAAGAGAGAGAGCATGTTTCGATGG37424255GGATGGCAACCATCTCATCTGATCTGGAAGTGCTTGTACGTGGGCTTCCC
Musa acuminata subsp. malaccensis isolate AA chromosome 15.
CP126384.1:37392323-37392342
TGACAGAAGAGAGAGAGCATGTTTCGATGG37392323GGATGGCAACCATCTCATCTGATCTGGAAGTGCTTGTACGTGGGCTTCCC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A01.
HG996466.1:2585379-2585398
TGACAGAAGAGAGAGAGCATGTTTCGATGG2585379GGATGGCAACCATCTCATCTGATCTGGAAGTGCTTGTACGTGGGCTTCCC
Musa schizocarpa genome assembly, chromosome: S01.
LS990915.1:2675206-2675225
TGACAGAAGAGAGAGAGCATGTTTCGATGG2675206GGATGGCAACCATCTCATCTGATCTGGAAGTGCTTGTACGTGGGCTTCCC
EST1233015 ESTSYN-F Musa acuminata AAA Group cDNA clone pESTSYNF-8N18 5', mRNA sequence.
ES432808.1:493-512
GGGAAGCCCACGTACAAGCACTTCCAGATC493AGATGAGATGGTTGCCATCCCCATCGAAACATGCTCTCTCTCTTCTGTCA
Comarum palustre genome assembly, chromosome: 9.
OX637580.1:20663878-20663897
ATGATCTCATGGTTTTTTCTGTGACATTAA20663878AGATGAGATGGTTGCCATCCAAACTCCAAACTACCGGTGCAAGATTTTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGATGGCAACCATCTCATCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGATGGCAACCATCTCATCT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.108 | 0.099 | search_plus_done; http://172.18.8.135:50400/match?q=GGATGGCAACCATCTCATCT&k=0&no_gap=0&offset=0&limit=50
0.183 | 0.076 | search_minus_done; http://172.18.8.135:50400/match?q=AGATGAGATGGTTGCCATCC&k=0&no_gap=0&offset=0&limit=46
0.185 | 0.001 | cgi_end;

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