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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:55:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys russatus genome assembly, chromosome: 5.
LR877216.1:79061979-79061998
TTAGACGAGATGTGCTTCCCTCATCCTCTG79061979GGATGGGACAGGTTGAGAGAAGTCCACATTAGTAGCAGGAAGTAACACTT
Acomys kempi genome assembly, chromosome: 16.
OU015370.1:77459379-77459398
CAGAGGACAATGTGCTTCCCTCATCCTCTG77459379GGATGGGACAGGTTGAGAGAAGTCCACGTTAGTCGCAGGAAGTAACACTT
Acomys dimidiatus genome assembly, chromosome: 16.
OU015389.1:76865578-76865597
CAGAGGACAATGTGCTTCCCTCATCCTCTG76865578GGATGGGACAGGTTGAGAGAAGTCCACGTTAGTCGCAGGAAGTAACACTT
Acomys percivali genome assembly, chromosome: 16.
OU015757.1:77487936-77487955
CAGAGGCCGATGTGCTTCCCTCATCCTCTG77487936GGATGGGACAGGTTGAGAGAAGTCCACATTAGTCGCAGGAAATAACACTT
Acomys percivali genome assembly, chromosome: X.
OU015760.1:15124872-15124891
TATCCATCTGGGTCACTGGGGGAAAATGTT15124872GGATGGGACAGGTTGAGAGATGGAGTCTGGCTTGTCATTACAAGGTTCCC
Raja brachyura genome assembly, chromosome: 2.
OY740782.1:148903231-148903250
ACATTGGAAAGATATTTCAGATAGTTACAT148903231GGATGGGACAGGTTGAGAGAGATATGAGCCAAACACAAGCAGCTGGGACC
Arachis hypogaea DNA, clone: AHGS49I02.
DH961682.1:386-405
ATGGAGGTGCTGCAACGGGTTGGAGGGAGG386GGATGGGACAGGTTGAGAGAGGGAGACAGCAGCATTGTTAGGGTTGAATG
Arachis hypogaea cultivar Shitouqi chromosome B07.
CP030999.1:40490807-40490826
ATGGAGGTGCTGCAACGGGTTGGAGGGAGG40490807GGATGGGACAGGTTGAGAGAGGGAGACAGCAGCATTGTTAGGGTTGAATG
Arachis ipaensis cultivar K30076 chromosome 07.
CP049898.1:41839903-41839922
ATGGAGGTGCTGCAACGGGTTGGAGGGAGG41839903GGATGGGACAGGTTGAGAGAGGGAGACAGCAGCATTGTTAGGGTTGAATG
Raja brachyura genome assembly, chromosome: X.
OY740817.1:9936437-9936456
AGTCCCACTTGCCTGTTTTTGGCACATATC9936437TCTCTCAACCTGTCCCATCCATGTACCTGTCTAATTGCTTCTTAAGGGCT
Arachis hypogaea DNA, clone: KIAC13N23.
DH965839.1:270-289
CATTCAACCCTAACAATGCTGCTGTCTCCC270TCTCTCAACCTGTCCCATCCCCTCCCTCCAACCCGTTGCAGCACCTCCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGATGGGACAGGTTGAGAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGATGGGACAGGTTGAGAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.206 | 0.197 | search_plus_done; http://172.18.8.135:50400/match?q=GGATGGGACAGGTTGAGAGA&k=0&no_gap=0&offset=0&limit=50
0.336 | 0.130 | search_minus_done; http://172.18.8.135:50400/match?q=TCTCTCAACCTGTCCCATCC&k=0&no_gap=0&offset=0&limit=41
0.337 | 0.001 | cgi_end;

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